Báo cáo sinh học: "Different genomic relationship matrices for single-step analysis using phenotypic, pedigree and genomic information" pdf
Báo cáo sinh học: "Different genomic relationship matrices for single-step analysis using phenotypic, pedigree and genomic information" pdf
... 2007,2(12):e1274.doi:10.1186/1297-9686-43-1Cite this article as: Forni et al.: Different genomic relationship matrices for single-step analysis using phenotypic, pedigree and genomic information. Genetics Selection Evolution ... 43:1http://www.gsejournal.org/content/43/1/1Page 7 of 7RESEARCH Open AccessDifferent genomic relationship matrices for single-step analysis using phenotypic, pedigree and genomic informationSelma Forni1*, Ignacio Aguilar2,3, Ignacy ... [10].Results Pedigree- based and genomic relationship coefficientsStatistics of pedigree- based and genomic relationship coefficients for genotyped animals (A22or G)areinTable 1. In G05 and GMF,...
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báo cáo sinh học:" Community-owned resource persons for malaria vector control: enabling factors and challenges in an operational programme in Dar es Salaam, United Republic of Tanzania" ppt
... girl and she asks what you want. You explainthat you need to go inside to look for breeding places and shemight tell you just wait. So you stand there waiting for minutes.Then a boy comes and ... perseverance and commitment. We thank the entire UMCP team for their cooperationduring the survey. Thanks to all the Dar es Salaam residents and theirrespective TCU, ward and municipal leaders for their ... Comparative evaluation of the Ifakaratent trap-B, the standardized resting boxes and the human landingcatch for sampling malaria vectors and other mosquitoes in urban Dares Salaam, Tanzania....
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Báo cáo sinh học: "Restricted maximum likelihood estimation for animal models using derivatives of the likelihood" pptx
... theformwith QR standing in turn for and for first and second derivatives, respectively. As outlined above, R is blockdiagonal for animals with submatrices Ew. Hence, matrices ... arewith QG standing for for first derivatives, and for second derivatives.As above, further simplifications are possible depending on the structure of G. For instance, for G as ... (Meyer, 1985); see Jensen and Mao (1988) for a review.Harville and Callanan (1990) considered different forms of the likelihood for bothNR and MSC and demonstrated how they...
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Báo cáo sinh học: " Exact p-value calculation for heterotypic clusters of regulatory motifs and its application in computational annotation of cis-regulatory modules" doc
... random sequencesFigure 3P-value distribution for eve2 and random sequences. Distribution of log10 (Pvalue) calculated for the M1 model as a func-tion of cutoff values for PWMs for BICOID and ... occurrences is 0.54 for bicoid and 0.31 for kruppel. The average p-value is 0.633.We took one of the random sequences and compared p-values calculated for various cutoff values in this randomsequence ... 6.8) whereas for the random sequence we see ridges between (2.2, 2.0) and (2.2, 4.8), and (2.8, 2.0) and (2.8, 4.8). As weexpected, it is impossible to choose the appropriate cutoff for PWMs of...
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Báo cáo sinh học: "A gene frequency model for QTL mapping using Bayesian inference" doc
... linked QTL [2,5,6] and provide information tomap QTL and for genetic evaluation using markers.This cosegregation (CS) information comes from thenon-random association of grand-parental origin ... disequilibrium informationwill contribute to the analysis through the model for themean of MQTL effects, and cosegregation informationwill contribute to the analysis through the model for covariances ... thebiallelic and multialleli c analyses fitted one or more QTLwith probability almost one, while the probability of fit-ting two or mo re QTL was .27 for multiallelic analysis and .61 for biallelic analysis. ...
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Báo cáo sinh học: " Longitudinal random effects models for genetic analysis of binary data with application to mastitis in dairy cattle" pdf
... mastitis at 30, 150 and 300 days for the best and worst fivecows. Such probability was higher than 0.92 for the best cows, and, in fact, theynever got mastitis on the mentioned dates. For the worst ... ⊗0,where K0 and 0are 3 × 3 matrices of genetic and residual (co)variancesbetween the parameters of the Wilmink function, respectively. For both matrices, flat and bounded priors were ... normal for systematic, genetic and permanent effects (b, β, u, p),truncated normal for the 3341 latent variables, scaled inverted chi-square for thegenetic variance in the first model (σ2u) and...
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Báo cáo sinh học: "Novel non-viral method for transfection of primary leukemia cells and cell lines" docx
... mmelectroporation cuvette, and incubated on ice for 10 min.After electroporation with a single pulse (electrical param-eters for K562 between 270 volt, 1050 µF and 300 volt,1800 µF, 99 Ω, and for HL60 electroporation ... determined and quantified by the expressionof the encoding plasmid pMGV after 24 and 48 hoursposttransfection. In summary, the transfection rates were3.0+/-1% for HL60 and 1.5+/-0.5% for K562 ... cells of three patients and flow cytometric analysis are shown in figure 2a and 2b. Figures 1b (K562cells) and 1c (HL60 cells) show the primary data of oneGenetic Vaccines and Therapy 2004, 2 http://www.gvt-journal.com/content/2/1/1Page...
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Báo cáo sinh học: " A new plasmid vector for DNA delivery using lactococci" pptx
... GrowthHormone (BGH polyA) and ii) a prokaryotic region, con-taining the RepA/RepC replication origin for both E. coli and L. lactis and a chloramphenicol resistance gene for bacteria selection.MethodsBacterial ... per milliliter): for E. coli, erythromy-cin (100) and chloramphenicol (10); for L. lactis,erythromycin (5) and chloramphenicol (10).DNA manipulationsDNA manipulations were performed as described ... wasobtained after BglII and ClaI digestion and gel purified(S.N.A.P. gel purification kit, Invitrogen). BglII/ClaI-digested and purified TOPO:VAX1 and pXylT:CYT frag-ments were ligated using T4 DNA ligase...
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Báo cáo sinh học: " Different models of genetic variation and their effect on genomic evaluation" pdf
... theaccuracy and robustness of genomic methods used for genomic selection under various underlying geneticmodels and marker densities and for these various mod-els to compare the accuracy of genomic ... there was no linkbetween genotypes and phenotypes other than pedigree information. This bias towards pedigree informationallowed traditional BLUP to outperform the GS meth-ods. However, this ... an equal variance for eachmarker and uses a genomic relationships matrix amongall individuals in a reference set and a test set allowingit to compute variance components and best linearunbiased...
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Báo cáo sinh học: "Different rates of synthesis of whey protein and casein by alleles of the β-lactoglobulin and α locus in cattle -casein s1" pptx
... accounted for by such an influence.was achieved by chromatofocusing (Sluyterman and Wijdenes, 1978). Purity and homogeneity was checked by Page electrophoresis (Raymond and Weintraub, ... heterozygotes and homozygotes of the Bavarian Simmental and Bavarian Brown Alpine cattle.MATERIALS AND METHODSThe data are based on casein resp. whey protein analysis of ... herd, year-season, stage and number oflactation and cows; that of the Brown Alpine herd, year-season, stage and numberof lactation, sire of the cow and genotypes at 3 loci...
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