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phụ lục 03 thiết kế trang cho một số ca sử dụng khác

Dự đoán và phân tích các trạng thái của Histone trong chuỗi DNA bằng phương pháp conditional random fields

Dự đoán và phân tích các trạng thái của Histone trong chuỗi DNA bằng phương pháp conditional random fields

Công nghệ thông tin

... Bảng Một số feature hữu ích cho lớp positive chọn từ mô hình CRFs, trường hợp k = k = T .số: trọng số feature tương ứng sau huấn luyện mô hình CRFs 68 Bảng 10 Một số feature hữu ích cho ... kiện sử dụng để gán nhãn cho chuỗi x cách chọn chuỗi nhãn y cho thu cực đại xác suất điều kiện p(y|x) Một số mô hình xác suất điều kiện gần xây dựng để thay cho mô hình generative toán gán nhãn Một ... trường hợp khác Có thể hình dung tham số tương ứng với đặc trưng giá trị xác suất chuyển xác suất phát sinh mô hình HMM 2.4.5 Một số thuật toán ước lượng tham số cho CRFs Ước lượng tham số cho mô...
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Tài liệu Báo cáo khoa học:

Tài liệu Báo cáo khoa học: "Conditional Random Fields for Word Hyphenation" docx

Báo cáo khoa học

... 661–672 MIT Press, Cambridge, MA, USA Fei Sha and Fernando Pereira 2 003 Shallow parsing with conditional random fields Proceedings of the 2 003 Conference of the North American Chapter of the Association ... All differences between rows in Table are significant, with one exception: the serious error rates for PATGEN and TALO are not statistically significantly different A similar conclusion applies to ... researchers can, we hope, soon invent even more accurate methods A third contribution of our work is a demonstration that current CRF methods can be used straightforwardly for an important application...
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Tài liệu Báo cáo khoa học:

Tài liệu Báo cáo khoa học: "Generalized Expectation Criteria for Semi-Supervised Learning of Conditional Random Fields" pdf

Báo cáo khoa học

... method presented here and CRR07 cannot be exact The technique described in CRR07 can be applied in two ways: constraints can be applied during learning, and they can also be applied during inference ... alone, it can be seen in Table that GE is the best performing method This is important, as it demonstrates that GE out of the box can be used effectively, without tuning and extra modifications ... This model can be applied to the combination of labeled and unlabeled instances, but cannot be applied in situations where only labeled features are available Additionally, our model can be easily...
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Tài liệu Báo cáo khoa học:

Tài liệu Báo cáo khoa học: "Discriminative Word Alignment with Conditional Random Fields" ppt

Báo cáo khoa học

... la de prestation le cadre dans canadiens par spécialistes seront utilisés véhicules ) ) a ( (a) With Markov features ii technique de aide la prestation le de cadre dans canadiens spécialistes ... used by six Canadian experts related to the provision of technical assistance ii ( ii ) ( a ) Three vehicles will be used by six Canadian experts related to the provision of technical assistance ... British Columbia, Canada, October P Koehn, F J Och, and D Marcu 2 003 Statistical phrasebased translation In Proceedings of HLT-NAACL, pages 81–88, Edmonton, Alberta J Lafferty, A McCallum, and F...
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Tài liệu Báo cáo khoa học:

Tài liệu Báo cáo khoa học: "Improving the Scalability of Semi-Markov Conditional Random Fields for Named Entity Recognition" pdf

Báo cáo khoa học

... information is important Micahel Krauthammer and Goran Nenadic 2004 Term identification in the biomedical literature Jornal of Biomedical Informatics John Lafferty, Andrew McCallum, and Fernando Pereira ... information To improve the scalability of semi-CRFs, we propose two techniques: the first is to introduce a filtering process that significantly reduces the number of candidate entities by using ... labels does not necessarily provide useful information because, in many cases, the previous label of a named entity is “O”, which indicates a non-named entity For 98.0% of the named entities...
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Báo cáo khoa học:

Báo cáo khoa học: "Efficient, Feature-based, Conditional Random Field Parsing" potx

Báo cáo khoa học

... In our case the values in the chart are the clique potentials which are non-negative numbers, but not probabilities this case the gains from adding additional clients decrease rapidly, because ... that this property is satisfied, without scaling, for objective functions that sum over the training data, as it is in our case, but any priors must be scaled down by a factor of b/ |D| The stochastic ... context-free parsing algorithm Communications of the ACM, 6(8):451–455 James Henderson 2004 Discriminative training of a neural network statistical parser In ACL 42, pages 96– 103 Mark Johnson 2001 Joint...
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Báo cáo khoa học:

Báo cáo khoa học: "Using Conditional Random Fields to Predict Pitch Accents in Conversational Speech" pptx

Báo cáo khoa học

... number of canonical phones binned into equal categories • Log Speech Rate; calculated on strings of speech bounded on either side by pauses of 300 ms or greater and binned into equal categories ... Phonological variables The last category of predictors, phonological variables, concern aspects of rhythm and timing of an utterance We have two main sources for these variables: those that can be ... the utterance length Below is the list of our textual features: • Number of canonical syllables • Number of canonical phones • Number of transcribed phones • The length of the utterance in number...
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Báo cáo khoa học:

Báo cáo khoa học: "Semi-Supervised Conditional Random Fields for Improved Sequence Segmentation and Labeling" pdf

Báo cáo khoa học

... one can measure the precision, recall and F-measure, given by # correct predictions precision = # predicted gene mentions # correct predictions recall = # true gene mentions precision recall ... longer concave, but we can still use it to effectively improve an initial supervised model To develop an effective training procedure, we first show how the derivative of the new objective can be ... overlap over all possible label sequences can be defined as As (2) is not concave, many of the standard global maximization techniques not apply However, one can still use unlabeled data to improve...
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Báo cáo khoa học:

Báo cáo khoa học: "Training Conditional Random Fields with Multivariate Evaluation Measures" potx

Báo cáo khoa học

... linear chain CRFs, which are typical CRF applications, have already been reported (Sha and Pereira, 2 003) MCE Criterion Training for CRFs The Minimum Classification Error (MCE) framework first ... regularization term can be rewritten in the following form: (5) y ∈Y\y where y ∗ is the correct output for x Here it can be noted that, for a given x, d() ≥ indicates misclassification By using d(), ... functions, such as F-score for text classification (Gao et al., 2 003) , and BLEU-score and some other evaluation measures for statistical machine translation (Och, 2 003) , have been introduced with reference...
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Báo cáo khoa học:

Báo cáo khoa học: "Fast Full Parsing by Linear-Chain Conditional Random Fields" docx

Báo cáo khoa học

... significantly better than previous cascaded chunking approaches such as Tsuruoka & Tsujii (2005) and Tjong Kim Sang (2001) Although the comparison presented in the table is not perfectly fair because ... w0 (up to length 10) w0 has a hyphen w0 has a number w0 has a capital letter w0 is all capital N(w0 ) the current word by lowering capital letters and converting all the numerals into ‘#’, and ... can then use the automatically created treebank as the additional training data for our parser This approach suggests that accurate (but slow) parsers and fast (but not-so-accurate) parsers can...
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Báo cáo khoa học:

Báo cáo khoa học: "Using Conditional Random Fields to Extract Contexts and Answers of Questions from Online Forums" docx

Báo cáo khoa học

... able to capture the dependency The context detection can be modeled as a classification problem Traditional classification tools, e.g SVM, can be employed, where each pair of question and candidate ... model has been successfully applied in NLP and text mining tasks (McCallum and Li, 2 003; Sha and Pereira, 2 003) However, our problem cannot be modeled with Linear CRFs in the same way as other NLP ... should be leveraged to detect answers The Linear CRF model can capture the dependency between contiguous sentences However, it cannot capture the long distance dependency between contexts and...
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Báo cáo khoa học:

Báo cáo khoa học: "Discriminative Language Modeling with Conditional Random Fields and the Perceptron Algorithm" pptx

Báo cáo khoa học

... and tagging or segmentation tasks (Lafferty et al., 2001; Sha and Pereira, 2 003; McCallum and Li, 2 003; Pinto et al., 2 003) CRFs use the parameters α ¯ to define a conditional distribution over the ... significantly better than the lattice perceptron at p < 0.001; the other two CRF trials were significantly better than the lattice perceptron at p < 0.01 On rt03, the N-best CRF trial was significantly ... control over-training The choice of LLR as an objective function can be justified as maximum a-posteriori (MAP) training within a Bayesian approach An alternative justification comes through a connection...
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Báo cáo khoa học:

Báo cáo khoa học: "Scaling Conditional Random Fields Using Error-Correcting Codes" docx

Báo cáo khoa học

... 188–191 Andrew McCallum 2 003 Efficiently inducing features of conditional random fields In Proceedings of UAI 2 003, pages 403 410 David Pinto, Andrew McCallum, Xing Wei, and Bruce Croft 2 003 Table extraction ... 2 003 Introduction to the CoNLL-2 003 shared task: Language-independent named entity recognition In Proceedings of CoNLL 2 003, pages 142–147, Edmonton, Canada Fei Sha and Fernando Pereira 2 003 ... and decoding can be much less than that of the standardly formulated CRF 4.1 Named entity recognition CRFs have been used with strong results on the CoNLL 2 003 NER task (McCallum, 2 003) and thus...
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Báo cáo khoa học:

Báo cáo khoa học: "Logarithmic Opinion Pools for Conditional Random Fields" ppt

Báo cáo khoa học

... collapse to category N • All types of verb collapse to category V • All types of adjective collapse to category J • All types of adverb collapse to category R • All other POS tags collapse to category ... derivative is tractable because we can use dynamic programming to efficiently calculate the pairwise marginal distribution for the LOP-CRF Using these expressions we can efficiently train the LOP-CRF ... labelling errors to examine the statistical significance of these results We test significance at the 5% level At this threshold, all the LOP-CRFs significantly outperform the corresponding unregularised...
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Báo cáo khoa học:

Báo cáo khoa học: "Using Conditional Random Fields For Sentence Boundary Detection In Speech" potx

Báo cáo khoa học

... A McCallum 2002 Mallet: A machine learning for language toolkit http://mallet.cs.umass.edu NIST-RT03F 2 003 RT-03F workshop agenda and presentations http://www.nist.gov/speech/tests/rt/rt2 003/ ... and J Zheng 2 003 Speech-to-text research at SRIICSI-UW http://www.nist.gov/speech/tests/rt/rt2 003/ spring/presentations/index.htm S Strassel, 2 003 Simple Metadata Annotation Specification V5.0 Linguistic ... Conference on Empirical Methods in Natural Language Processing Y Liu 2004 Structural Event Detection for Rich Transcription of Speech Ph.D thesis, Purdue University A McCallum and W Li 2 003 Early results...
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accelerated training of conditional random fields with stochastic

accelerated training of conditional random fields with stochastic

Tin học

... exponential family distribution over Y, parameterized by the natural parameter θ ∈ Θ, can be written in its canonical form as Let X := {xi ∈ X }m be a set of m data points i=1 and Y := {yi ∈ Y}m be ... The sufficient statistics φ(x, y) represent salient features of the data, and are typically chosen in an application-dependent manner as part of the CRF design for a given machine learning task ... of choice for training CRFs When exact inference cannot be performed, stochastic gradient methods appear sensitive to appropriate scheduling of the gain parameter(s); SMD does this automatically...
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an introduction to conditional random fields for relational learning

an introduction to conditional random fields for relational learning

Tin học

... ) for cases where xc occurs in the training data, and p(yc |x) > McCallum [2 003] presents a more principled method of feature selection for CRFs Second, if the observations are categorical rather ... vocabulary Thus, in text applications, CRF features are typically binary; in other application areas, such as vision and speech, they are more commonly real-valued Third, in language applications, ... Andrew McCallum and David Jensen A note on the unification of information extraction and data mining using conditional-probability, relational models In IJCAI 03 Workshop on Learning Statistical Models...
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efficient training of conditional random fields.ps

efficient training of conditional random fields.ps

Tin học

... scaling This is a highly promising result, indicating that such parameter estimation techniques make CRFs a practical and efficient choice for labelling sequential data, as well as a theoretically ... can also be considered to be a weighting of indicating the informativeness of feature fk 3.4 Potential Functions for CRFs The maximum entropy framework provides significant justification for choosing ... transition distributions and, in the case of states with a single outgoing transition, causes the observation to be effectively ignored The label bias problem can significantly undermine the benefits of...
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hidden conditional random fields for gesture recognition

hidden conditional random fields for gesture recognition

Tin học

... underlying graphical model captured spatial dependencies between hidden object parts In this work, we modify the original HCRF approach to model sequences where the underlying graphical model captures ... Expand Vertically (EV) arm gesture, the arms move vertically apart and return to the resting position In the Shrink Vertically (SV) gesture, both arms begin from the hips, move vertically together ... interaction in classification In ICCV, 2 003 J Lafferty, A McCallum, and F Pereira Conditional random fields: probabilistic models for segmenting and labelling sequence data In ICML, 2001 A McCallum, D Freitag,...
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dynamic conditional random fields- factorized probabilistic models

dynamic conditional random fields- factorized probabilistic models

Tin học

... processing nearly always cascade through the chain, causing errors in the final output This problem can be solved by jointly representing the subtasks in a single graphical model, both explicitly ... that does the individual labeling tasks sequentially, and has potentially many practical implications, because cascaded models are ubiquitous in NLP Also, we have shown that using approximate inference ... between CRF+CRF and the FCRF is statistically significant by a two-sample t-test (p < 0.002) In fact, there was no subset of the To simulate the effects of a cascaded architecture, the POS labels in...
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