medicinal chemistry structure modification structure activity relationships and metabolism
Tài liệu Báo cáo khoa học: Structure-activity relationships of a-conotoxins targeting neuronal nicotinic acetylcholine receptors ppt
... position 12 (Table 1) appears to contribute to a4b2 and a7 subtype activity but not a3b2 activity A decrease in a4b2 and a7 subtype activity but not a3b2 activity was observed in the [R12A]GID mutant ... suggest that the diversity of conotoxin primary structures is likely to increase, and this will aid in the elucidation of structureactivity relationships and in the characterization of the nAChR subtypes ... position for activity [42–45] Further point mutations of ImI were performed by Rogers et al ([R11E]ImI, [R7L]ImI and [D5N]ImI) and Lamthanh et al ([R7A]ImI) and the three-dimensional structures...
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Báo cáo khoa học: Structure–activity relationships of fowlicidin-1, a cathelicidin antimicrobial peptide in chicken docx
... initial structures, and 20 best structures with the lowest energy were selected and analyzed with molmol [48] and procheck-nmr [19] Structure figures were generated by using molmol The structures of ... Essential role of the conformational flexibility of Structure activity relationships of fowlicidin-1 42 43 44 45 46 47 48 helices and on the lipid binding activity of apolipophorin-III J Biol Chem 276, ... NH-Hb and Ha-Hb NOEs Qualitative analysis of short- and medium-range NOEs, 3JHNHa coupling constants, and slowly exchanging amide proton patterns was used to characterize the secondary structure...
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Tài liệu Báo cáo khoa học: Second messenger function and the structure–activity relationship of cyclic adenosine diphosphoribose (cADPR) doc
... investigation in the future Structure activity relationship of cADPR In-depth reviews covering the chemistry and biological activity of many cADPR analogues have been published [16,53–55] and the reader interested ... hypoxanthine) and the diphospho-bridge, as they can be replaced by much simpler ether strands These ether strands mimic the distance between the nucleobase and the diphospho-bridge, but on the other hand ... 653–664 54 Shuto S & Matsuda A (2004) Chemistry of cyclic ADPribose and its analogs Curr Medical Chem 11, 827–845 55 Potter BV & Walseth TF (2004) Medicinal chemistry and pharmacology of cyclic ADP-ribose...
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Báo cáo khoa học: Structure–cytotoxicity relationships in bovine seminal ribonuclease: new insights from heat and chemical denaturation studies on variants ppt
... Molecular modeling The structures of monomeric and dimeric variants of BS-RNase were calculated from the NMR and X-ray structures deposited at the PDB In particular, the NMR structure of mBS (PDB ... ribonuclease, its dimeric structure, and its resistance to the cytosolic ribonuclease inhibitor Biochemistry 40, 3492– 3496 Sica F, Di Fiore A, Merlino A & Mazzarella L (2004) Structure and stability of ... (15 and 16) and to regions 45–49 and 101–103, which ˚ are less than A from the Arg80 side chain The overlay of the 1H-15N-HSQC spectrum of mBS with those of its G16S ⁄ N17T ⁄ P19A ⁄ S20A mBS and...
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Báo cáo khoa học: Structure–activity relation for synthetic phenoxazone drugs Evidence for a direct correlation between DNA binding and pro-apoptotic activity pdf
... changes in both their anti-tumour activity and DNAbinding properties, providing unambiguous evidence of a marked structure activity relation Materials and methods Drugs and DNA A series of actinomycin ... eqn are shown in Fig The binding of ligands with natural and model nucleic acids results in an increase in Tm and DT of complexes Ó FEBS 2003 Structure activity of synthetic phenoxazone drugs ... that intercalation and external binding of ligand with DNA, characterized by the parameter r (the number of mol of ligand per mol of base pairs), depend on the ratio of DNA and ligand concentrations...
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Multi target selection and high throughput quantitative structure activity relationship model development
... (Bioorganic & Medicinal Chemistry Letters, Bioorganic & Medicinal Chemistry, European Journal of Medicinal Chemistry, European Journal of Organic Chemistry and Journal of Medicinal Chemistry, etc) and databases ... actual and the predicted pIC50 values of SVR and ChemBench kNN QSAR models trained by pre-2010 inhibitors in predicting the activity of post-2010 ACE inhibitors and non-inhibitors inside and outside ... actual and the predicted pIC50 values of SVR and ChemBench kNN QSAR models trained by pre-2010 inhibitors in predicting the activity of post-2010 Cox2 inhibitors and non-inhibitors inside and outside...
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Design, optimization and structure activity relationship study of CD2 derived peptides for immunomodulation
... immunomodulation 14 1.3.1 CD2 structure 15 1.3.2 CD2 ligands and ligand binding sites 16 1.3.3 Properties of CD2-ligand interactions 17 1.3.4 Structural basis for CD2-ligand interactions 18 1.3.5 ... interface β-strands (CC’, C’C’’ and FG loop) The parent peptides were then subjected to truncation and alanine scanning for optimization Finally, the biological activity and secondary structure of ... membrane The crystal structure of rCD2 D1 revealed that nine β strands sandwiched in two β sheets of AGFCC’C’’ and BED with four well-defined hairpin structures of CC’, C’C’’, FG and DE (Figure 1-2...
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Computational methods for structure activity relationship analysis and activity prediction
... Heterogeneous Structure- Activity Relationships and Variable Activity Landscapes Chemistry and Biology 2007, 14, 489–497 [33] Peltason, L.; Bajorath, J SAR Index: Quantifying the Nature of StructureActivity ... StructureActivity Relationships Journal of Medicinal Chemistry 2007, 50, 5571– 5578 [34] Guha, R.; Van Drie, J H Structure- Activity Landscape Index: Identifying and Quantifying Activity Cliffs ... Discovery and Design 1998, 9–11, 225–232 [2] Peltason, L.; Bajorath, J Systematic Computational Analysis of StructureActivity Relationships: Concepts, Challenges and Recent Advances Future Medicinal Chemistry...
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Mechanistic studies of anti malarial spiroindolones and synthesis and structure activity relationship studies of an inhibitor of dengue proliferation
... was isolated and both the relative and absolute stereochemistry of the compound were determined by X-ray crystallography (Figure 3) Figure Structure of NITD20 Figure X-ray crystal structure of ... to be fast and reversible and would not be expected to affect the stereochemistry of the final tetrahydro-β-carboline product in a standard Pictet-Spengler reaction On the other hand, the formation ... condensation of histamine and 5-chloroisatin 2.1 Investigation of imines formed between methyl tryptamine and 5-chloroisatin 2.1.1 Synthesis and characterization of imines and After some modifications to...
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Tài liệu Gravitational Physics: Exploring the Structure of Space and Time pdf
... Exploring the Structure of Space and Time http://www.nap.edu/catalog/9680.html Gravitational Physics Exploring the Structure of Space and Time Committee on Gravitational Physics Board on Physics and Astronomy ... provide candid and critical comments that will assist the authors and the NRC in making the published report as sound as possible and to ensure that the report meets institutional standards for ... Exploring the Structure of Space and Time http://www.nap.edu/catalog/9680.html GRAVITATIONAL PHYSICS: EXPLORING THE STRUCTURE OF SPACE AND TIME When gravitational fields are weak and vary only...
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Tài liệu FLUID-STRUCTURE INTERACTIONSSLENDER STRUCTURES AND AXIAL FLOW VOLUME 1 ppt
... FLUID -STRUCTURE INTERACTIONS SLENDER STRUCTURES AND AXIAL FLOW VOLUME FLUID -STRUCTURE INTERACTIONS SLENDER STRUCTURES AND AXIAL FLOW VOLUME MICHAEL P PAIDOUSSIS ... velocity and pressure fields, V and p For fluid -structure interaction problems in which the forces induced by the fluid on the structure are the only concern, most of the information on V and p ... analytical modelling and interpretation of experimental observation far easier than in systems involving bluff bodies and cross-flow; it permits a better understanding of the physics and makes a more...
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Tài liệu Báo cáo khoa học: Neuronal growth-inhibitory factor (metallothionein-3): structure–function relationships docx
... al Structure reactivity–function study of GIF A1 B1 A2 B2 Fig (A1) and (A2) Simulated structure of the b-domain of rlMT2 (B1) and (B2) Predicted structure of the b-domain of hGIF Panels A1 and ... spectroscopic and biochemical studies Structure reactivity–function study of GIF showed that the whole structure and dynamic properties of sGIF, as well as the solvent accessibility and stability ... independently, and domain–domain interactions exist and affect the properties and reactivity of each domain [20–22] Furthermore, our results, and those of other bioassays, showed that the inhibitory activity...
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Tài liệu Medicinal Chemistry and Pharmacological Potential of Fullerenes and Carbon Nanotubes docx
... Medicinal Chemistry and Pharmacological Potential of Fullerenes and Carbon Nanotubes CARBON MATERIALS: CHEMISTRY AND PHYSICS A comprehensive book series ... acids and their impact on health 2.2 2.2.1 Carbon Nanotubes Structure and Characteristics CNTs, discovered in 1991 by Iijima (Iijima, 1991; Iijima and Ichihashi, 1993), display unique structures and ... fullerene and light, so the polymer was tested on mice affected by bone tumor After injection and irradiation, tumor size and weight were reduced and the mouse survival time was extended (Jiang and...
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Báo cáo khoa học: New insights into structure–function relationships of oxalyl CoA decarboxylase fromEscherichia coli pptx
... scattering (SAXS) and protein crystal structure analysis Results Expression and purification EcODC was expressed in E coli strain BL21, and purified by homogenization, streptomycin sulfate and ammonium ... Superposition of structure models of the ADP-EcODC complex in crystal and solution The crystal structure of 2q28 is shown in ribbon and line style in deepsalmon, the solution structure model of ... formigenes and P oxalaticus [2,7] For the substrate oxalyl CoA, a KM of 4.8 lm and a kcat of 60.7 per second and subunit were determined from steady-state measurements at pH 6.5 and 30 °C (Fig and Table...
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Báo cáo khoa học: Evolutionary changes to transthyretin: structure–function relationships ppt
... eightstranded b-sheets, one inner (strands DAGHH¢G¢A¢D¢) and one outer (strands CBEFF¢E¢B¢C) (Fig 2) The interactions predominantly involved are hydrogen bonding between two F strands (F, F¢) and ... the liver, and the activity of FEBS Journal 276 (2009) 5330–5341 ª 2009 The Authors Journal compilation ª 2009 FEBS 5335 Structure function relationships of transthyretin P Prapunpoj and L Leelawatwattana ... amphibians and fish Here, we have shown how evolution of the structure function relationship of a protein can be studied using comparative biochemistry and how hypotheses regarding the structure function...
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Báo cáo khoa học: Studies on structure–function relationships of indolepyruvate decarboxylase from Enterobacter cloacae, a key enzyme of the indole acetic acid pathway ppt
... (triplets of 5-H and 6-H at 7.04 and 7.12 p.p.m., doublets of 4-H and 7-H at 7.39 and 7.42 p.p.m and the singlet of 2-H at 7.16 p.p.m with identical integrals of all signals) and to the b-CH2 ... and spin systems of the indole moiety (triplets of 5-H and 6-H at 7.12 and 7.18 p.p.m., doublets of 4-H and 7-H at 7.43 and 7.75 p.p.m and the singlet of 2-H at 7.81 p.p.m with identical integrals ... Kenyon, G.L & Cleland, W.W (1988) Kinetics and mechanism of benzoylformate decarboxylase using 13 C and solvent deuterium isotope effects on benzoylformate and benzoylformate analogues Biochemistry 27,...
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Gravitational Physics Exploring the Structure of Space and Time docx
... provide candid and critical comments that will assist the authors and the NRC in making the published report as sound as possible and to ensure that the report meets institutional standards for ... Exploring the Structure of Space and Time http://www.nap.edu/catalog/9680.html GRAVITATIONAL PHYSICS: EXPLORING THE STRUCTURE OF SPACE AND TIME When gravitational fields are weak and vary only ... for our understanding of the fate of the universe, and also for particle physics and quantum gravity • The use of gamma-ray, x-ray, optical, infrared, and radio telescopes on Earth and in space...
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Báo cáo khoa học: Relationship between the structure of guanidines and N-hydroxyguanidines, their binding to inducible nitric oxide synthase (iNOS) and their iNOS-catalysed oxidation to NO pptx
... 3.8- and 3.6-fold lower than those for their nonfluorinated analogues BuGua and BuNOHG, respectively, and the koff app values for TFBGua and TFBNOHG are 1.6 and times lower than those for BuGua and ... 7- and 25-fold lower than that for l-Arg, and those for the non-a-amino acid N-hydroxyguanidines BuNOHG and TFBNOHG were 3- and 12-fold lower than that for NOHA The koff app values for BuGua and ... be 10 and times higher than that for l-Arg, and those for BuNOHG and TFBNOHG were 20 and times higher than that for NOHA Interestingly, konapp values for the fluorinated compounds TFBGua and TFBNOHG...
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Báo cáo khoa học: Structure, epitope mapping, and docking simulation of a gibberellin mimic peptide as a peptidyl mimotope for a hydrophobic ligand pot
... bond energy between the protein and ligand, van der Waals energy between the protein and ligand and within the ligand, and internal torsion energy for the ligand To consider FEBS Journal 272 ... of 50 structures (A) and ribbon diagram of the lowest energy structure of the major conformer of peptide SD (B) One disulfide bridge (Cys2–Cys10) and side chains of all residues are ball -and- stick ... complex structures to find the best model of the peptide SD-mAb 4-B8(8) ⁄ E9 complex structure The fitness values of the three complex structures were 51.26, 49.49, and 1.97 The complex structure...
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