... segment
types are of importance: Start Of Frame (SOF), De ne Human Table (DHT), De ne Quantiza-
tion Table (DQT), and Start Of Scan (SOS (quite appropriate)). Here are some type de nitions
that describe ... k'>=64 then ]] else acdecode t k'
]
]
Both the function dcdecode and the function acdecode will be used in subsection 5.1. The names
`dc' and `ac' are used frequently ... modern, polymorphically
typed and lazily evaluated languages like Haskell HuFa92], Gofer Jone94] and Clean PlEe95].
We will prove this by giving an implementation of a JPEG decoder in the Gofer...
... characterization of numerous com-
plexes of the human HPRT and several bacterial and
protozoan HPRTs have been undertaken [13–17]. The
structure of human HPRT can be divided into two
domains: a core domain and ... loops
left unmodeled. The 3D structures of HPRTs have
been divided into a core and a hood domain [14]. The
core domain of PRTFDC1 contains a six-stranded
twisted parallel b-sheet surrounded by three ... elucidation of the structure of PRTFDC1
and the de nition of its ligand binding specificity from
a large metabolome library provides an initial start
point for de ning the molecular function of
PRTFDC1....
... Model and simulations of cytochrome c reduction by NOS
enzymes. (A) Scheme of cytochrome c reduction. The model uses
four kinetic rates: dissociation (k
1
) and association (k
2
) of the FMN
and ... states
(NADPH -free ⁄ CaM -free, NADPH-bound ⁄ CaM -free
and CaM-bound) [59]. Subsequent measures made with
CT point mutants of nNOS (R1400E, R1400S or
F1395S) [60,61], and nNOS mutants possessing graded
CT ... activity
and FMN deshielding. The figure plots relative cytochrome c reduc-
tase activities of various CaM -free nNOS flavoproteins and CaM-
bound wild-type versus their degree of FMN deshielding....
... 5.4 and 5.8), Tris ⁄ HCl (pH 6.5, 7.0, 7.5 and 8.0) and glycine ⁄ NaOH (pH 8.6, 9.0 and 9.6). (B) Dependence of
Rep245 polymerase activity on metal ions. The results are the means of three independent ... Rep245
was capable of utilizing both ribonucleotides and deoxyribonucleotides for
de novo primer synthesis and it synthesized DNA products up to several kb
in length in a template-dependent manner. ... recommended cut-off of 6) and the secondary
structure profile (data not shown), both of which point
to considerable fold similarity. To build the Rep245
model, we performed 16 pairwise and multiple
alignments...
... of LN
and LE (circles) modules, domain IV, and a coiled-coil (cc) domain
II,I.
Fig. 2. SDS/PAGE of puri®ed recombinant fragments c ontaining
domain IV of b1orb2 chain under nonreducing (A) and ... explore further structural
and tissue differences of the b1andb2 chain. This revealed
glycosaminoglycan modi®cation a nd disul de- dependent
dimerization of b1IV but not of b2IV, which could be
readily ... exclude the possibility that they represent artefacts
of the treatments used. Nevertheless, we also cannot
dismiss the possibility of t he disul de -dependent dimeriza-
tion of laminins in which domain...
... The
sequences of PL and LPL are identical at 31% of their
residues in the N-terminal domain (40% similarity) and are
28% identical in the C-terminal domain (38% similarity).
The catalytic efficiency and ... in the C-terminal domain were made to
address the functional roles of the C-terminal domain in
heparin binding and in catalytic activity. We also provide
experimental evidence of head-to-tail subunit ... N-terminal domain. Recently, however,
several lines of evidence have demonstrated that the
Correspondence to I. Inoue, Division of Genetic Diagnosis, Institute
of Medical Science, The University of Tokyo,...
... monomer) and that both
models place S1 and S2 on the same actin monomer. Where
the present model differs is that we place S2 beside S1 on
subdomain 1 of actin instead of on subdomain 2 and this
requires ... France;
3
Genes and Development Group,
Department of Biomedical Sciences, University of Edinburgh, Scotland
It is generally assumed that of the six domains that comprise
gelsolin, domain 2 is primarily ... quenching of the chromophore (K
d
¼ 2 mM).
Determination of the 159–193 peptide/actin interface
Two approaches were used for identification of large
fragments of actin to which gelsolin 159–193 peptide...
... University of Debrecen, Hungary;
3
Department of Inorganic Chemistry,
and
4
Research Group for Antibiotics, Department of Chemistry, University of Debrecen, Hungary;
5
International Institute of Molecular ... Gyula Batta
4
and Jacek Kuz
´
nicki
1,5
1
Department of Molecular and Cellular Neurobiology, Nencki Institute of Experimental Biology, Warsaw, Poland;
2
Department of Biochemistry and Molecular ... the
calcium-binding ligands are designated by their coordinates: x, y, z,-y,
-x and -z [60]. Residues discussed in the text are given in bold (G34,
K60 and G81 of CR I –II and G29, G66, R68, G71 and G74 of Calb
I–II)....
... O()
→0
.
ENTROPY AND THE LOCALIZATION OF EIGENFUNCTIONS 449
• A
i
2
= A
i
except on a set of measure of order h
κ
.
• For i = j, A
i
A
j
= 0 except on a set of measure of order h
κ
.
We must ... choices is
bounded by l
(1−τ)N+n
1
. Choose N
0
such that l
n
1
≤ e
N
0
Λδ
50
.
This ends the proof of Lemma 2.3.1.
468 NALINI ANANTHARAMAN
Semi-classical symbols of order m and degree l (depending ... operators on L
2
(M) and denote
A
i
(t) their evolutions under the quantum flow:
A
i
(t) = exp
− it
h∆
2
◦ A
i
◦ exp
it
h∆
2
.
We de ne the “measures” of cylinder sets under µ
h
, by the expressions:
µ
h
[α
0
,...
... [12] and Gamide [13].
Although both Ggly and Gamide bind iron, only in the
case of Ggly is biological activity dependent on ferric
ion binding [12]; Gamide is fully active in the absence of
metal ... homeostasis. Inde-
pendent evidence for a connection between gastrins
and iron status has been provided by a microarray
comparison of gene expression profiles in the stomachs
of gastrin -de cient and wild-type ... obviously essential to a full understanding
of the interaction. The independent involvement of iron
[17] and nonamidated gastrins such as Ggly [10] in the
development of colorectal cancer make it...
... state of
KH domains. Although several KH domains form
ABC
Fig. 10. Crystal structure of tandem type II KH domains of NusA in complex with RNA. The tandem KH1–KH2 domains of NusA recognize
RNA ligand ... by tandem but independent
KH domains – NMR structure of the KH3 and KH4
domains of FBP in complex with FUSE ssDNA
FUSE-binding protein has four KH domains, which
are separated by linkers of varying ... b-sheet
composed of three antiparallel b-strands is abutted by
three a-helices (a1, a2, and a¢). The b-sheet in type I
KH domains consists of three b-strands in the order
b1, b¢ and b2. The b1-strand and...
... stubbornly avoided purification and cloning,
remaining elusive despite the efforts of a number of groups.
Nevertheless, the information reported here adds consider-
ably to our understanding of sialate ... patients we provide strong
evidence suggesting that the level of O-acetylated sialic acids
present in normal and diseased human colon may be
dependent on the relative activities of OAT to lysosomal
OAE. ... for Biomolecular Research, Department of Bio-Organic Chemistry, Section of Glycoscience and
Biocatalysis, Utrecht University, the Netherlands
A decrease in the level of O-acetylated sialic acids...
... utilization
of reduced nucleotide coenzymes by Pyrococcus. The
central metabolism of this organism uses an unusual
NADPH-dependent sul de dehydrogenase which is
capable of both the NADPH-dependent reduction ... NADPH-dependent reduction of
elemental sulfur and the NADP
+
-dependent oxida-
tion of ferredoxin [22]. A unique NADPH-dependent
alcohol dehydrogenase with wide substrate specificity
and a strong preference ... and thermoactivity of the CoADR
phCoADR is stable for months at both )80 °C and
)20 °C, and has half-lives of > 100 and 39 h at 85°
and 95 °C, respectively. Figure 3 shows the dependence
of...
... represen-
tation of the relative densities of the free DNA measured at
increasing concentrations of HbpR. The percentage offree DNA
was calculated from densitometric measurements of the radiolabe-
led bands ... DNA-binding site and by deletion
of the effector domain
David Tropel
1
* and Jan R. van der Meer
1,2
1 Process of Environmental Microbiology and Molecular Ecotoxicology, Swiss Federal Institute ... central
Keywords
Pseudomonas azelaica; r54-dependent
transcriptional activators; XylR family
Correspondence
J. R. van der Meer, Department of
Fundamental Microbiology, Batiment de
Biologie, University of Lausanne,...