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Development of computational methods for the rapid determination of NMR resonance assignment of large proteins

Development of computational methods for the rapid determination of NMR resonance assignment of large proteins

Development of computational methods for the rapid determination of NMR resonance assignment of large proteins

... determination is the spectral assignment procedure This involves sequence-specific resonance assignment of NMR signals and the assignment of NOESY spectra Resonance assignment forms the basis for characterizing ... obtain the assignments of the Cα and CO of the same residue Then, the CO frequency is used to obtain assignments for the HN and 15N of residue (i+1) with the HNCO experiment Finally, the NH and ... applications for solution NMR 1.3.2 TROSY triple -resonance experiments for resonance assignments of large proteins NMR experiments provide a set of unique combinations of neighboring resonance spin...
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Báo cáo y học:

Báo cáo y học: "Classification methods for the development of genomic signatures from high-dimensional data" potx

... evaluation of the performance of a classification algorithm The SN is the proportion of correct positive classifications out of the number of true positives The SP is the proportion of correct ... classifications out of the number of true negatives The accuracy is the total number of correct classifications out of the total number of samples The PPV is the probability that a patient is ... We define the prediction accuracy of the ensemble by majority voting as: Ar = P (Y ≥ k + 1) Accuracy of classification algorithms for the van de Vijver et al [17] data Figure Accuracy of classification...
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comparison of the methods for the determination of surface acidity of solid catalysts

comparison of the methods for the determination of surface acidity of solid catalysts

... out of the use of this material Downloaded by [McGill University Library] at 07:35 15 December 2012 Comparison of the Methods for the Determination of Surface Acidity of Solid Catalysts LUCIO FORNI ... the quantity of exchanged deuterium and from the quantity of water formed during the reaction The fraction of the various forms of hydrogen can be determined from the ratios of the areas of the ... made of frequency shifts of the OH group band at various concentrations of the alcohol in the solvent, in the presence of the solid, with the known acidity constants of the alcohols From such a comparison...
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Development of database and computational methods for disease detection and drug discovery

Development of database and computational methods for disease detection and drug discovery

... conventional and molecular detection methods of pathogen; (2) bioinformatics and cheminformatics in drug discovery; (3) database development; (4) virtual screening of drug discovery; (5) objectives and ... efficient and effective To help achieve this purpose, this work on "Development of Database and Computational Methods for Disease Detection and Drug Discovery" is conducted as one of the strategies ... comprehensive information about the primary targets and drug of the approved, clinical trial, and experimental drugs These database lead to a better understanding of the disease and benefit for drug discovery...
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Development of NMR methods for the structural elucidation of large proteins

Development of NMR methods for the structural elucidation of large proteins

... DEVELOPMENT OF NMR METHODS FOR THE STRUCTURAL ELUCIDATION OF LARGE PROTEINS ZHENG YU (B.Sc., Xiamen University) A THESIS SUBMITTED FOR THE DEGREE OF DOCTOR OF PHILOSOPHY DEPARTMENT OF BIOLOGICAL ... analysis of complex, x    Development of NMR methods for the structural elucidation of large proteins Summary   crowded and folded high-dimensional spectra On the basis of this software platform, ... 199 xii    Development of NMR methods for the structural elucidation of large proteins List of Figures   List of Figures  Figure 1.1: The flowchart of protein structure determination by NMR Figure...
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Part   development of novel methods for the synthesis of homoallylic alcohols part II  multigrams synthesis of ( ) epibatidine

Part development of novel methods for the synthesis of homoallylic alcohols part II multigrams synthesis of ( ) epibatidine

... 25 25 25 Time (h) 2.0 5.0 6.0 1.5 5.0 2.0 Yield %b (1 03:10 4) (E/Z)c 25 (1 00: 0) (8 0/2 0) 23 (1 00: 0) (8 0/2 0) 25 (7 6:2 4) (8 0/2 0) 45 (1 00: 0) (8 0/2 0) 49 (1 00: 0) (8 0/2 0) 69 (1 00: 0) (8 0/2 0) 105 105a 105b ... Yield 9a (% ) ( : ) (E/Z) 15 (7 5:2 5) (1 00/ 0) 22 (2 3:7 7) (8 0/2 0) 40 (9 9: 1) (8 2/1 8) 55 (1 00: 0) (8 0/2 0) 69 (1 00: 0) (8 0/2 0) OH 105f Yield 11f (% ) 13 28 23 10 The investigations on the effects of solvent ... Synthetic Route 183 iii SUMMARY PART I: Development of Novel Methods for the Synthesis of Homoallylic Alcohols In the development of novel methods for the synthesis of homoallylic alcohols, two conceptual...
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Comparison of Methods for the Extraction of Bioflocculants from Activated Sludge

Comparison of Methods for the Extraction of Bioflocculants from Activated Sludge

... an effort to develop an effective extraction method for bioflocculants from the microbial cell surface Materials and Methods Activated sludge samples Activated sludge samples were collected from ... was the most effective extraction method for activated sludge However, cell disruption is not effective for the isolation of bioflocculants Thus, NaOH extraction was the most effective method for ... polymer extraction methods (steaming extraction, NaOH extraction, SDS extraction, and washing extraction) were compared to develop an effective extraction method for bioflocculants from activated sludge...
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Tài liệu Báo cáo khoa học:

Tài liệu Báo cáo khoa học: "Methods for the Qualitative Evaluation of Lexical Association Measures" doc

... qualitative evaluation of lexical association measures, mainly for the following reasons: the instability of precision values obtained from the rst few percent of the data in the SLs; the lack of signicant ... precision values above 50% for the rst 10% of the list, but is outperformed by the t-test afterwards Looking at the rst 40% of the data, there is a big gap between the good measures (t-test, ... identication of between 75% (AdjN) and 80% (PNV) of the TPs (ii) For the rst 40% of the SLs, and lead to the worst results, with outperforming 10% 20% 30% -test 40% 50% 60% 70% 80% 90% 100% part of signicance...
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nmr methods for the investigation of structure and transport

nmr methods for the investigation of structure and transport

... number of spins By linearity of the Fourier transform the direct relation between the peak integral and the number of spins of the corresponding chemical group holds for the spectrum of superposed ... derivation due to the time-dependence of the unit vectors Using the product rule for the derivation and the fact that the time derivative of the unit vector is the cross product of !rf with this ... expressions Qn and MCk the naturals n and k signify the index of the result and measured data vectors, respectively The latter results from the discretization of e.g kx in (2.38) For the sake of completeness,...
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Báo cáo sinh học:

Báo cáo sinh học: " Shell Vial culture Assay for the rapid diagnosis of Japanese encephalitis, West Nile and Dengue-2 viral encephalitis" pdf

... Standardization of Shell vial culture After adaptation of JE, WN and Dengue-2 viruses (NIV strains) to the porcine kidney cell line, the strains were used for the standardization of shell vial ... rapid diagnostic method for the diagnosis of viral encephalitis Early, prompt collection, transport and processing of the CSF samples, would make SVC a better method for the rapid diagnosis of ... cell culture, though cumbersome, time consuming and less sensitive is still considered the gold standard for the diagnosis of flaviviral encephalitis [8] Shell vial culture is a modification of the...
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báo cáo hóa học:

báo cáo hóa học: " The evolution of methods for the capture of human movement leading to markerless motion capture for biomechanical applications" pptx

... University of California [5,6] provided a tremendous resource of knowledge related to the mechanics of human movement The work at the University of California formed the basis for many of the fundamental ... factors limiting the advancement of the study of human movement is the measurement of skeletal movement from markers or sensors placed on the skin The movement of the markers is typically used to ... term markerless motion capture Markerless methods for human motion capture Motion capture is an important method for studies in biomechanics and has traditionally been used for the diagnosis of the...
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báo cáo hóa học:

báo cáo hóa học: " Method optimization and validation for the simultaneous determination of arachidonic acid metabolites in exhaled breath condensate by liquid chromatography-electrospray ionization tandem mass spectrometry" doc

... screw-cap vial for HPLC analysis and 100 µL of the working solution of the internal standard were added to each sample Then the samples were vortex mixed and a 900 µL aliquot was injected into the LC/MS/MS ... some of the structural isomers of prostaglandins, which resulted in the same parent-daughter ion transitions The whole analytical run time, including the recondition step of the column for the ... to the slope and linearity of the calibration curve Due to the low content of matrix compounds in EBC in contrast to other matrix such as urine or plasma which could influence the response of the...
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báo cáo hóa học:

báo cáo hóa học:" Shell Vial culture Assay for the rapid diagnosis of Japanese encephalitis, West Nile and Dengue-2 viral encephalitis" pdf

... Standardization of Shell vial culture After adaptation of JE, WN and Dengue-2 viruses (NIV strains) to the porcine kidney cell line, the strains were used for the standardization of shell vial ... rapid diagnostic method for the diagnosis of viral encephalitis Early, prompt collection, transport and processing of the CSF samples, would make SVC a better method for the rapid diagnosis of ... cell culture, though cumbersome, time consuming and less sensitive is still considered the gold standard for the diagnosis of flaviviral encephalitis [8] Shell vial culture is a modification of the...
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Cocoa Processing Methods for the Production of High Quality Cocoa in Vietnam ppt

Cocoa Processing Methods for the Production of High Quality Cocoa in Vietnam ppt

... with the Vietnamese research Institutes involved Success Alliance is also thanked for their assistance in providing information regarding the cocoa industry in Vietnam and in the establishment of ... darken in colour during drying as the majority of browning reactions will occur during this process DRYING OF COCOA Drying of cocoa is an important step in cocoa processing as some of the reactions ... get air into the fermenting cocoa and to help make the fermentation even throughout the cocoa When more air gets into the cocoa, as a result of turning, the rate of fermentation will increase...
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