Báo cáo y học: "miRTRAP, a computational method for the syst

Báo cáo y học: "miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data" pptx

... apparent false negative rate of approximately 5% and a false discovery rate of approximately 19%. To systematically compare the miRTRAP and miRDeep methods, we tested the new Ciona library data using ... computational analysis. WS and DH analyzed the data. WS, DH and ML wrote the manuscript. All authors read and approved the final manuscript. Acknowledgements We thank Benj...

Ngày tải lên : 09/08/2014, 20:21

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Báo cáo y học: "InSite: a computational method for identifying protein-protein interaction binding sites on a proteome-wide scale" pot

... 'observed interaction' variables for each of the assays, as follows. For the yeast two-hybrid datasets of [9,10], these variables are binary-valued. They take the value 'true' ... sensors for the actual interaction variable T ij .I. Note that an actual interaction variable may have several observa- tion variables if the pair appears in multiple assays....

Ngày tải lên : 14/08/2014, 08:20

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Báo cáo y học: "FusionSeq: a modular framework for finding gene fusions by analyzing paired-end RNA-sequencing data" pdf

... two ends of a PE read, ge ne annotation sets, expression values, and so on. Software and data availability FusionSeq is available for download at [34]. Data sets used in this study are available via ... helped analyze the data and drafted the manuscript. Additional material Additional file 1: Supplementary material, tables and figures .The results of different mapping tools and a...

Ngày tải lên : 09/08/2014, 22:23

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Báo cáo y học: "Hybrid dynamic/static method for large-scale simulation of metabolism" pptx

... metabolism Katsuyuki Yugi † , Yoichi Nakayama* † , Ayako Kinoshita and Masaru Tomita Address: Institute for Advanced Biosciences, Keio University, Fujisawa, Kanagawa, 252–8520, Japan. Email: Katsuyuki Yugi ... Additional file 1]. Evaluation of errors at steady state To compare the accuracy of the hybrid method with the conventional dynamic kinetic method analytically, we firs...

Ngày tải lên : 13/08/2014, 23:20

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Báo cáo y học: "Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences" ppsx

... provides a framework for perform- ing computational analyses, systematically repeating analyses, capturing all details of performed analyses, and annotating analyses. Using Galaxy Pages, researchers can ... When a user performs an analysis using Galaxy, it automatically generates metadata for each analysis step. Galaxy’s metadata includes every piece of informa- tion necessary...

Ngày tải lên : 09/08/2014, 20:22

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Báo cáo Y học: Kinetic and biochemical analyses on the reaction mechanism of a bacterial ATP-citrate lyase ppt

... biochemical analyses on the reaction mechanism of a bacterial ATP-citrate lyase Tadayoshi Kanao, Toshiaki Fukui, Haruyuki Atomi and Tadayuki Imanaka Department of Synthetic Chemistry and Biological ... play a vital role in providing acetyl-CoA and oxaloacetate in the cytosol as starting materials for a variety of biosynthetic pathways. Rat and human ACLs from various organ...

Ngày tải lên : 08/03/2014, 22:20

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Báo cáo y học: "Deep transcranial magnetic stimulation for the treatment of auditory hallucinations: a preliminary open-label study" pptx

... department of Beer Ya’akov Mental Health Center and head of the electroconvulsive therapy unit of the Beer Ya’akov Mental Health Center. PD is paid by by Beer Ya’akov Mental Health Center. YR ... Beer Ya’akov Mental Health Center. ZA works at the Department of Neurobiology of the Weizmann Institute of Science and also serves as a research consultant for Brainsway. DP i...

Ngày tải lên : 09/08/2014, 01:21

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Báo cáo y học: "TWEAK: a novel biomarker for lupus nephritis" pot

... sensitivity and specificity. In the previous issue of Arthritis Research & Therapy, Schwartz and colleagues demonstrated the potential value of urinary TNF-like weak inducer of apoptosis (uTWEAK) as ... inadequate because substantial renal tissue damage can occur before function is impaired to a detectable extent [4]. Renal biopsy remains the gold standard for assessment...

Ngày tải lên : 09/08/2014, 14:22

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Báo cáo y học: " NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitid" pot

... chromosomal inversions (Additional data file 1). To achieve an annotation as accurate as possible, we anno- tated 8013's genome manually by taking advantage of all the functionalities of the ... reported the assembly of an archived library of 4,548 transposition mutants in strain 8013 and the design of a method for high- throughput characterization of transpo...

Ngày tải lên : 09/08/2014, 20:20

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Báo cáo y học: "Are chest compressions safe for the patient reconstructed with sternal plates? Evaluating the safety of cardiopulmonary resuscitation using a human cadaveric model" docx

... 2 2 lateral, xyphoid Cadaver 3 2 lateral Cadaver 4 3 lateral Cadaver 5 1 lateral Figure 3 Elevation and examination of deep sternal cortex and viscera. McKay et al. Journal of Cardiothoracic ... Evaluating the safety of cardiopulmonary resuscitation using a human cadaveric model Douglas R McKay 1* , Hosam F Fawzy 2 , Kathryn M McKay 3 , Romy Nitsch 4 , James L Mahoney 5 Abstract Bac...

Ngày tải lên : 10/08/2014, 09:22

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