... supported by National Technology Agency of Finland
and Ministry of Education of Finland (to J. I. V.). We wish to thank
Prof. Dan Larhammar, University of Uppsala, for his advice and
extremely ... sequence alignment of studied POP family
enzymes.
Ó FEBS 2004 Evolutionary relationships of the POP family enzymes (Eur. J. Biochem. 271) 2715
can be considered as a model enzyme of...
... r
lysates of cells that had been transfected with expression
vectors containing the entire coding regions of the wild-type
shark DNases I, substitution of the signal sequence regions
of each of the ... protein targeting pathway: hydrophobicity
of the central core and t he presence of an a-helical stru cture
in the signal s equence r egion of the protein [40–42]. A nalysis
us...
... ex-
amples of the previous section. From the point of
view of bag -of- word methods, the pairs (T
1
, H
1
)
and (T
1
, H
2
) have both the same intra-pair simi-
larity since the sentences of T
1
and ... head of constituents. The
example of Fig. 1 shows that the placeholder
0
climbs up to the node governing all the NPs.
5.3 Pruning irrelevant information in large
text trees
Often o...
... 1
shows the average number of clusters with each
clustering method shown chapter 3 by the part of
speech. WC and WF are the average number of
senses by the part of speech.
In Table 1 and ... the word senses numbered i of
the word x. I
x
is the word sense indexing function
of x that gives an index to each sense of the word
x. All contextual words x
i
±j
of a central wo...
... Cb). Cf is a par-
tially ordered list of centering candidates; 2 the Cb,
at the head of Cf, is the current center of attention.
After each utterance, one of three operations are
possible:
* ... sequence of retentions, which is
preferred over a sequence of shifts.
When intonation and centering collide
My synthesis of the claims in PH90 and GJW89 pro-
duces an attentional...
... classes of the instances of CCG-Std and CCG-
GTRC, respectively:
Definition 1 Gatrc is the collection of
G's
(extension of
a G E G, ta)
such that:
l. For the lexical function f of G ... bounded by the maximum
number of arguments of a lexical category, we add all
the instances of wrapping required for simulating the ef-
fect of GTRC into the lexicon of G"...
... y
PUZZLE
.Thelatter
method w i th the Ô+GÕ option f or rates of heterogeneity
Fig. 4. Structural comparison of four representatives of class I of the superfamily of bacterial, fungal, and plant peroxidases. ... introduction of new
Ó FEBS 2004 Molecular evolution of heme peroxidases (Eur. J. Biochem. 271) 3307
Fig. 2. Multiple sequence alignment of 50
selected representatives...
... 4% of the
total soluble protein content of the cell [48].
Fig. 3. Microbial mechanisms of glyphosate
degradation. (A) Two principal pathways of
glyphosate degradation are known.
Top: cleavage of ... molecular mode of action of glypho-
sate and the molecular basis for glyphosate resistance.
Structure and function of EPSPS
EPSPS catalyzes the transfer of the enolpyruvyl moiety...
... for neuro-
muscular synapse formation but are necessary for sta-
bilization of agrin-induced clusters of acetylcholine
receptors. J Neurosci 21, 3151–3160.
30 Luo YQ, Hirashima N, Li YH, Alkon ... revealed tau bands of 64 kDa in the GST–Fyn-
SH3-bound fraction from cells transfected with each of
the tau constructs. Densitometric analysis of Fyn-SH3-
bound tau as a proportion o...
... surface of the molecule and is rather
far away from the trinuclear site. Therefore, the
C-terminal sequence of RlL might be more of an evolu-
tionary relic than a functional feature of the enzyme.
The ... molecules A and B
(and C and D) of the asymmetric unit form a weak
dimer (Fig . 6). On the basis of calculations performed
Fig. 6. (A) Cartoon representation of dimers of TaL...