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modeling of protein ligand complex based on multiple templates and user specified restraints

macromolecular crystallography, part d

macromolecular crystallography, part d

Sinh học

... locations of peaks (based on the model), weighted by a factor based on the number of heavy atom sites in the trial solution Our cross-validation difference Fourier method is based on the idea of ... measure One of these would be the connectivity of the positive density in the man.15 Another feature of protein crystals is the presence of distinct regions of protein and solvent The electron density ... Calculation of expected probability distributions for values of electron density in the protein and solvent regions (based on statistics of maps generated from model structures) Calculation of the...
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Pfam: A Comprehensive Database of Protein Domain Families Based on Seed Alignments pptx

Pfam: A Comprehensive Database of Protein Domain Families Based on Seed Alignments pptx

Cơ sở dữ liệu

... 5% of the sequences in Swissprot may contain such errors (T Gibson, personal communication) Seed alignment construction HMM construction The initial members of a seed were collected from one of ... de- Fig Proportion of Swissprot 33 (A) in Pfam, based on sequences and residues The portion of unique sequences is slightly overestimated because of the exclusion of fragments and sequences shorter ... DATABASE OF PROTEIN DOMAIN FAMILIES TABLE I (Continued) TABLE I (Continued) Description Homeobox domain Protein hormones (family of somatotropin, prolactin and others) Peptide hormones (fmaily of glucagon,...
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Báo cáo y học:

Báo cáo y học: "A systematic comparative and structural analysis of protein phosphorylation sites based on the mtcPTM database" ppt

Báo cáo khoa học

... distributions with the frequencies of occurrences of potential (yellow) and known (cyan and red) phosphosites along the length of the structures The positions correspond to all nonoverlapping and equally ... into one of the two small cores of the histone domain (Figure 8d) This region is involved in both DNA binding and interactions with another histone monomer In this case, the introduction of phosphate ... Evolutionary conservation of phosphorylated sites The plots show the distribution of the percentage of known (red) or potential (cyan) phosphosites presenting a given degree of conservation (between...
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frequency domain numerical modelling of visco acoustic waves based on finite difference and finite element discontinuous galerkin methods

frequency domain numerical modelling of visco acoustic waves based on finite difference and finite element discontinuous galerkin methods

Điện - Điện tử

... computation of the solutions of the equation for multiple sources The LU decomposition of A is a time and memory demanding task but is independent of the source, and, therefore is performed only once, ... Boundary conditions In seismic exploration, two boundary conditions are implemented for wave modelling: absorbing boundary conditions to mimic an infinite medium and free surface conditions on the ... position of one grid node, the Sinc function reduces to a Dirac function at the source position and no approximation is used for the source positioning If the spatial support of the Sinc function...
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Tài liệu Báo cáo khóa học: Further insights into the assembly of the yeast cytochrome bc1 complex based on analysis of single and double deletion mutants lacking supernumerary subunits and cytochrome b pdf

Tài liệu Báo cáo khóa học: Further insights into the assembly of the yeast cytochrome bc1 complex based on analysis of single and double deletion mutants lacking supernumerary subunits and cytochrome b pdf

Báo cáo khoa học

... helix of subunit and helices G and H1 of cytochrome b and between the N-terminus of subunit and helix a of cytochrome b The figure was constructed from the crystal structure of the yeast bc1 complex ... analysis of DNA on agarose gels, restriction endonuclease analysis, ligation of DNA fragments, Ó FEBS 2004 1212 V Zara et al (Eur J Biochem 271) transformation of Escherichia coli and isolation of ... exhibited the strongest defect in the assembly of the catalytic subunits of cytochrome bc1 complex This strain showed only 18% and 6% of the wild-type levels of iron– sulfur protein and cytochrome...
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Báo cáo khoa học:

Báo cáo khoa học: "Development of synthetic peptide ELISA based on nonstructural protein 2C of foot and mouth disease virus" doc

Báo cáo khoa học

... htuom-dna-toof fo nietorp larutcurts-non fo yticinegonummI F onirboS ,CJ ziaS ,J ozapoD ,A zeugirdoR 21 523 408-997 ,481 ,1991 ygoloriV snoitcefni tnetsisrep etal fo noitceted ni snegitna larutcurtsnon ... refsnartortceleonummi deknil-emyzne na htiw CBA3-ASILE tceridni na fo metsys denibmoc a :noitaniccav citametsys rednu elttac ni ecnallievrus suriv esaesid htuom dna toof rof ygetarts citsongaidores ... devresnoc ylhgih era VDMF fo sPSN fo secneuqes dica onima eht ,snietorp larutcurts eht ot tsartnoc ni ,taht nwonk saw tI noiteled dica onimA† sdica onima evitcepser eht yb dekram sepytbus dna sepyt...
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Reliability analysis of a power system based on the multi state system theory

Reliability analysis of a power system based on the multi state system theory

Tài liệu khác

... {5550 ≤ G < 5700} Based on the operators defined in (7) and (8), the universal generating function of the branches can be obtained, and then the universal generating function of the power system ... Journal of Jilin University (Engineering and Technology Edition), 2007, Vol.37, No.3, pp 672–674 G Levitin, The Universal Generating Function in Reliability Analysis and Optimization, London: Springer, ... multistate monotone coherent systems IEEE Transactions on Reliability, 1994, Vol 43, No.2, pp.242– 250 J Huang, M J Zuo, and Y Wu, “Generalized multi-state k-out -of- n:G systems,” IEEE Transactions on...
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Tài liệu Creating Constraints, PrimaryKeys, Relationships Based on Multiple Columns pdf

Tài liệu Creating Constraints, PrimaryKeys, Relationships Based on Multiple Columns pdf

Kỹ thuật lập trình

... when a DataRelation object is created relating the two tables Constraints are only enforced if the EnforceConstraints property is true The Add( ) method of the ConstraintCollection of the DataTable, ... the DeleteRule and UpdateRule properties, which define the action to be taken By default, a UniqueConstraint is created on the parent table and a ForeignKeyConstraint is created on the child table ... the multicolumn unique constraint result.Append("Creating unique constraint on parent table." + Environment.NewLine); dtParent.Constraints.Add(new UniqueConstraint("UConstraint", new DataColumn[]...
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Tài liệu Gait Pattern Classification of Healthy Elderly Men Based on Biomechanical Data ppt

Tài liệu Gait Pattern Classification of Healthy Elderly Men Based on Biomechanical Data ppt

Sức khỏe người cao tuổi

... average age of 28.0 years, and none were over 35 years old None had a limb length discrepancy larger than l&m, and all Table 1: Mean Values of the Demographic Information and of the Phasic and Temporal ... developed of the Yl family in the (A) sagittal, is overlaid in bold distance of 8.7 and 13.7, respectively They form one family of 10 trials, El, and a smaller one, E2, of 6, all consisting of elderly ... at least one complete gait cycle of the right lower limb A third camera was placed in front of the subject and aligned along the axis of progression Reflective markers were located on the subject...
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Báo cáo khoa học:

Báo cáo khoa học: "Automatic Acquisition of English Topic Signatures Based on a Second Language" potx

Báo cáo khoa học

... as context vectors in Concept Space A context vector is the sum of the vectors of concepts that occur in a context window If many of the concepts in a window have a strong component for one of ... Section demonstrates the application of this resource on WSD, and presents the results of our experiments Section discusses factors that could affect the acquisition process and then we conclude ... Proceedings of the 16th Conference of the American Association of Artificial Intelligence Rada Mihalcea 2003 The role of non-ambiguous words in natural language disambiguation In Proceedings of the Conference...
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Báo cáo

Báo cáo " MODEL OF CONDUCTIVITY FOR PEROVSKITES BASED ON THE SCALING PROPERTY OF GRAIN BOUNDARY " ppt

Báo cáo khoa học

... Model of conductivity for perovskites based on 53 Table summarizes the measurement details and results (D, f, L and L ) For the calculation of f , the percolation threshold concentration xc ... the change in conduction mechanism away from the bandwidth-controlled conduction to the possible boundary-controlled percolative conduction To fit the data in the low temperature region we estimated ... Nature and Scaling Exponents of Non-Drude Currents in Non-Fermi Liquids, arXiv:cond-mat/0104095 G Dobrescu, D Berger, F Papa, N I Ionescu, M Rusu, Fractal analysis of micrographs and adsorption isotherms...
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Báo cáo khoa học:

Báo cáo khoa học: "Dependency Parsing of Japanese Spoken Monologue Based on Clause Boundaries" docx

Báo cáo khoa học

... bunsetsu has one or more ancillary words, the type of dependency is the lexicon, part -of- speech and conjugated form of the rightmost ancillary word, and if not so, it is the part -of- speech and conjugated ... section describes a parsing unit of Japanese monologue Section presents dependency parsing based on clause boundaries The parsing experiment and the discussion are reported in Sections and 5, ... was performed based on wrong clause boundaries that were provided by clause boundary analysis On the other hand, the conventional method correctly parsed 46 dependency relations among 152 that...
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Báo cáo khoa học: A novel transmembrane topology of presenilin based on reconciling experimental and computational evidence pptx

Báo cáo khoa học: A novel transmembrane topology of presenilin based on reconciling experimental and computational evidence pptx

Báo cáo khoa học

... that is conserved between the PS and PSL is located in the proximity of, or within, HRX In addition, HRX is a strongly hydrophobic region and all the predictors consider it to be a TM region The ... low-resolution experiments [31] The conflicting results from published studies on PS topology illustrate the limitations of low-resolution experiments In this study we have used computational prediction ... and seven, respectively Results and Discussion All of the experimentally inferred topology models agree that HRI–VI are indeed TM regions [18–24] A majority of models agree on the localization...
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Báo cáo khoa học:

Báo cáo khoa học: "Framework of Semantic Role Assignment based on Extended Lexical Conceptual Structure: Comparison with VerbNet and FrameNet" ppt

Báo cáo khoa học

... grounds for relations maintain clarity based on concrete structural relations A semantic relation construction of frames based on structural relationships is another possible application of LCS approaches ... Dang, and Martha Palmer 2000 Class -based construction of a verb lexicon In Proceedings of the National Conference on Artificial Intelligence, pages 691–696 Menlo Park, CA; Cambridge, MA; London; ... argue that some types of relationships between frames are automatically calculated using the LCS approach For example, one of the relations is based on an inclusion relation of two LCS structures...
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Báo cáo khoa học:

Báo cáo khoa học: "A PREFERENCE MECHANISM BASED ON MULTIPLE CRITERIA RESOLUTION" ppt

Báo cáo khoa học

... Correspondences: The notion of correspondence between (sub)trees is central topreference rules of the binary type A number of def'mitions of this concept can be envisaged: i The correspondence ... [Jackendoff 1985] According to this framework, preference can only been decided on the basis of a number of criteria, and a preference mechanism is not based on a dichotomy between correct and wrong ... set of constraints wmcn must hold between the constituents of the two (sub)trees to be compared The syntax for a unary rule is ce constraints in the annotation part of the rule A simple constraint...
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SYNTHESIZE AND INVESTIGATE THE CATALYTIC ACTIVITY OF THREE-WAY CATALYSTS BASED ON MIXED METAL OXIDES FOR THE TREATMENT OF EXHAUST GASES FROM INTERNAL COMBUSTION ENGINE

SYNTHESIZE AND INVESTIGATE THE CATALYTIC ACTIVITY OF THREE-WAY CATALYSTS BASED ON MIXED METAL OXIDES FOR THE TREATMENT OF EXHAUST GASES FROM INTERNAL COMBUSTION ENGINE

Tiến sĩ

... Composition of mixture gases at different reaction conditions for C3H6 oxidation Composition Concentration, % Deficient oxygen Excess oxygen condition Excess oxygen condition with condition with ... MnCo 1-3 and CeCo 1-4 catalysts in excess oxygen condition 49 Figure 3.3 C3H6 conversion of CeCo1-4 in different reaction conditions (condition a: excess oxygen condition with the presence of CO: ... influence of CO and C3H6 at lean and H2 at rich conditions on NO conversion is investigated, both at steady-state conditions Furthermore, the model is also applied for the simulation of emissions of...
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Báo cáo hóa học:

Báo cáo hóa học: "Assessment of skeletal muscle fatigue of road maintenance workers based on heart rate monitoring and myotonometry" docx

Hóa học - Dầu khí

... testing end of myometer; amax is the maximal amplitude of oscillation, and ∆l is the depth of the displacement of the testing end Measurements for determination of muscle tone during one week work ... left-handed; the only reason The proportion of workers with differences in their muscle tone depending on the length of service in the specific occupation was various As we see, the number of road ... sometimes don't put the whole foot on the floor, but support one or both legs only on their toes or keep their feet on the horizontal bars of their chairs thus straining also m gastrocnemius Tone of...
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Báo cáo hóa học:

Báo cáo hóa học: " Anomalous heat transfer modes of nanofluids: a review based on statistical analysis" doc

Hóa học - Dầu khí

... published work and enables the demonstration of a general view of the thermal performance of nanofluids The second level focuses on the most commonly studied nanofluid types and compositions and makes ... for conduction and convection and for pool boiling and CHF Sergis and Hardalupas Nanoscale Research Letters 2011, 6:391 http://www.nanoscalereslett.com/content/6/1/391 Conduction/convection/mixed ... and Diffusion,Deposition of NPs on Heating Surface Brownian Motion,Deposition of NPs on Heating Surface Aggregation and Diffusion,Thermal Conductivity Enhancement (alone) Long Range Structural...
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Báo cáo hóa học:

Báo cáo hóa học: " Research Article Synthesis of an Optimal Wavelet Based on Auditory Perception Criterion" potx

Hóa học - Dầu khí

... representation of QMF bank [14, 15], the constrained optimization problem (31) is converted into an unconstrained one The use of lattice QMF representation for converting the constrained optimization ... spread of wavelet in time This definition of time-duration gives a measure of time localization of the wavelet [25] Now, the above definition of time duration is used for selecting the support of the ... Critical band a: Critical band b: Critical band f: Critical band e: Critical band 13 c: Critical band g: Critical band c: Critical band 11 f: Critical band 14 d: Critical band h: Critical band a:...
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Báo cáo hóa học:

Báo cáo hóa học: " Research Article Design and Experimental Evaluation of a Vehicular Network Based on NEMO and MANET" pdf

Hóa học - Dầu khí

... the previous section, the range of the available access points and VANET links are estimated considering a simplification of the driving speed and the time of connection This section presents more ... Milagro, a “Experimental demonstration of the viability of IEEE 802.11b based inter-vehicle communications,” in Proceedings of the 4th International Conference on Testbeds and Research Infrastructures ... these conditions are only present in this segment, since the rest of roads have a clear space on one side This fact enables the reflection of signals on the various walls Moreover, the second interesting...
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