managing and analysing genomic data using hpc and clouds

Báo cáo y học: " Integrating diverse genomic data using gene sets" ppt

Báo cáo y học: " Integrating diverse genomic data using gene sets" ppt

Ngày tải lên : 09/08/2014, 23:20
... expression data; C1 – single data type analysis using copy number data; INT – analysis of four data types using the integrative method; AvgP and MinP – analysis of four data types using meta-analytic ... sets whose p-value is less then 05 E1 and E2 – single data type analysis using expression data; C1 and C2 – single data type analysis using copy number data Table - P-values for top-30 gene ... related to sugar metabolic processes E1 and E2 – single data type analysis using expression data; C1 and C2 – single data type analysis using copy number data Table - Areas under the Receiver...
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2012 (EBOOK) collecting, managing, and assessing data using sample surveys

2012 (EBOOK) collecting, managing, and assessing data using sample surveys

Ngày tải lên : 09/08/2017, 10:27
... Collecting, Managing, and Assessing Data Using Sample Surveys Collecting, Managing, and Assessing Data Using Sample Surveys provides a thorough, step-by-step guide to the design and implementation ... of surveys, Web-based surveys, coding and data entry, data expansion and weighting, the issue of nonresponse, and the documenting and archiving of survey data The book is an excellent introduction ... travel and activity diaries as a data collection mechanism, and has written extensively on issues of sample design, data expansion, nonresponse biases, and measurement issues  Collecting, Managing, ...
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Tài liệu Managing and tabulating data in Excel docx

Tài liệu Managing and tabulating data in Excel docx

Ngày tải lên : 09/12/2013, 15:15
... Copying And Pasting Validation Rules 56 3.4 Selecting All Cells With The Same Data Validation Rule 56 3.5 Using “Forms” And Data Validation” 56 3.6 Autocorrect 57 CHAPTER 4.1 USING FILL AND OTHER ... 12.7 Icons relevant to External Data 195 CHAPTER 13 13.1 Data from the Internet 195 READING ASCII TEXT DATA 198 Understanding ASCII Text data 199 Why is data stored and distributed in this format? ... “1995,” “2000” and “2010”) 2.2.A NEW DATA You can enter the data for a new case/row by clicking on “New” and typing in the data for the first series, pressing the “TAB and then entering the data for...
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Tài liệu Add, Edit, and Delete Data Using the DataGrid Control doc

Tài liệu Add, Edit, and Delete Data Using the DataGrid Control doc

Ngày tải lên : 21/01/2014, 12:20
... OnUpdateCommand="dgRegion_UpdateCommand" OnCancelCommand="dgRegion_CancelCommand" OnEditCommand="dgRegion_EditCommand" OnDeleteCommand="dgRegion_DeleteCommand" >
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Android chapter18a reading XML data Using SAX and W3C Parsers

Android chapter18a reading XML data Using SAX and W3C Parsers

Ngày tải lên : 16/03/2014, 23:40
... xmlns:android="http://schemas.android.com/apk/res/android" android:orientation="vertical" android:layout_width="fill_parent" android:layout_height="fill_parent"> ... xmlns:android="http://schemas.android.com/apk/res/android" android:layout_width="fill_parent" android:layout_height="fill_parent" android:orientation="vertical" android:background="#ff0000ff">
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Querying, Managing, and Administering Databases Using SQL Server 2005 doc

Querying, Managing, and Administering Databases Using SQL Server 2005 doc

Ngày tải lên : 27/06/2014, 12:20
... Using XQuery Read the following topic in the section Manipulating the XML Data of Chapter of the book Querying and Managing Data Using SQL Server 2005: Using XQuery NIIT Querying, Managing, and ... name and data type b Options applicable to the input parameter c Return parameter data type and optional name d Output parameter name and data type 4.10 Querying, Managing, and Administering Databases ... retrieved 3.4 Querying, Managing, and Administering Databases Using SQL Server 2005 NIIT Tips and Tricks The following tips and tricks will help you effectively use DML commands and use indexes in...
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Managing and Mining Graph Data part 62 pdf

Managing and Mining Graph Data part 62 pdf

Ngày tải lên : 03/07/2014, 22:21
... biomolecular target’s chemical data analysis In recent years, the trend has been to integrate chemical data with protein and genetic data (bioinformatics data) and analyze the problem over multiple ... relate drugs and targets explicitly For example, Yamanish et al.([60]), developed profiles to repre- 602 MANAGING AND MINING GRAPH DATA sent interactions between drugs and targets, and then used ... Co-clustering documents and words using bipartite spectral graph partitioning In Knowledge Discovery and Data Mining, pages 269–274, 2001 [10] J L Durant, B A Leland, D R Henry, and J G Nourse Reoptimization...
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Managing and Mining Graph Data part 1 pptx

Managing and Mining Graph Data part 1 pptx

Ngày tải lên : 03/07/2014, 22:21
... Introduction to Graph Data Charu C Aggarwal and Haixun Wang Introduction Graph Management and Mining Applications Summary References Graph Data Management and Mining: A Survey of Algorithms and Applications ... for Data Mining and Information Retrieval 181 181 186 187 187 188 190 191 193 194 196 197 198 199 202 204 205 207 208 211 212 212 217 218 219 221 226 227 229 231 viii MANAGING AND MINING GRAPH DATA ... 10.2 The General Cases 11 Conclusions and Summary References Exact and Inexact Graph Matching: Methodology and Applications Kaspar Riesen, Xiaoyi Jiang and Horst Bunke Introduction Basic Notations...
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Managing and Mining Graph Data part 2 docx

Managing and Mining Graph Data part 2 docx

Ngày tải lên : 03/07/2014, 22:21
... sizes of the second and third-largest connected components (CC2 and CC3) stabilize We focus on these next-largest connected components in (c) 84 3.4 3.5 MANAGING AND MINING GRAPH DATA xvi 3.6 3.7 ... (a) and (b) Graph (a) is a minimum common supergraph of graph (b) and (c) A possible edit path between graph 𝑔1 and graph 𝑔2 (node labels are represented by different shades of gray) Query and database ... 7.2 The translation of a graph pattern into a rule of Datalog A sample graph pattern and graph Feasible mates using neighborhood subgraphs and profiles The resulting search spaces are also shown...
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Managing and Mining Graph Data part 3 potx

Managing and Mining Graph Data part 3 potx

Ngày tải lên : 03/07/2014, 22:21
... Aggarwal and H Wang (eds.), Managing and Mining Graph Data, Advances in Database Systems 40, DOI 10.1007/978-1-4419-6045-0_1, © Springer Science+Business Media, LLC 2010 MANAGING AND MINING GRAPH DATA ... data than in the case of multi-dimensional data The problem of managing graph data is related to the widely studied field of managing XML data Where possible, we will draw on the field of XML data, ... chapters expand on the various areas of graph mining We discuss these below 4 MANAGING AND MINING GRAPH DATA Natural Properties of Real Graphs and Generators In order to understand the various...
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Managing and Mining Graph Data part 4 ppsx

Managing and Mining Graph Data part 4 ppsx

Ngày tải lên : 03/07/2014, 22:21
... graph data management and mining algorithms are required This includes web data, social and computer networking, biological and chemical data, and software bug localization 16 MANAGING AND MINING ... software bug localization and computer networking In addition, many new kinds of data such as semiC.C Aggarwal and H Wang (eds.), Managing and Mining Graph Data, Advances in Database Systems 40, DOI ... algorithms and applications 2.1 Indexing and Query Processing Techniques Existing database models and query languages, including the relational model and SQL, lack native support for advanced data...
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Managing and Mining Graph Data part 5 pptx

Managing and Mining Graph Data part 5 pptx

Ngày tải lên : 03/07/2014, 22:21
... both the database and the IR communities Graph is a general structure and it can be used to model a variety of complex data, including relational data and XML data Because the underlying data assumes ... convolution kernels MANAGING AND MINING GRAPH DATA 24 [94], random walk kernels [81] and diffusion kernels [119] In random walk kernels [81], we attempt to determine the number of random walks between ... nodes in the graph independently and perform random walks starting from these nodes These random walks can be Graph Data Management and Mining: A Survey of Algorithms and Applications 29 used in order...
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Managing and Mining Graph Data part 7 pptx

Managing and Mining Graph Data part 7 pptx

Ngày tải lên : 03/07/2014, 22:21
... collection uniformly at random MANAGING AND MINING GRAPH DATA 46 Let 𝐴 be the set of edges in the graph Let 𝜋𝑖 denote the steady state probability of node 𝑖 in a random walk, and let 𝑃 = [𝑝𝑖𝑗 ] denote ... cycles and paths) in the graph, and hashing them into a bit-string In another line of work, researchers use data mining methods to find frequent subgraphs [150] in a chemical graph database, and ... princi- 44 MANAGING AND MINING GRAPH DATA ple, is that the properties and biological activities of a chemical compound are related to its structure Thus, graph mining may help reveal chemical and biology...
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Managing and Mining Graph Data part 8 ppt

Managing and Mining Graph Data part 8 ppt

Ngày tải lên : 03/07/2014, 22:21
... in Data Streams SIAM Conference on Data Mining, 2005 56 MANAGING AND MINING GRAPH DATA [10] R Agrawal, A Borgida, H.V Jagadish Efficient Maintenance of Transitive Relationships in Large Data and ... underlying data Graph Data Management and Mining: A Survey of Algorithms and Applications 55 Conclusions and Future Research In this chapter, we presented a survey of graph mining and management ... representation of the relationships between the different methods and data elements of a program Different kinds of edges are used to denote control and data dependencies The first step is to determine conditional...
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Managing and Mining Graph Data part 9 pdf

Managing and Mining Graph Data part 9 pdf

Ngày tải lên : 03/07/2014, 22:21
... 2004 [140] A McGregor Finding Graph Matchings in Data Streams APPROXRANDOM, pp 170–181, 2005 64 MANAGING AND MINING GRAPH DATA [141] T Milo and D Suciu Index structures for path expression In ... probabilistic models for relational data In UAI, pages 485–492, 2002 66 MANAGING AND MINING GRAPH DATA [175] H Tong, C Faloutsos, J.-Y Pan Fast random walk with restart and its applications In ICDM, ... labeled and unlabeled o data on a directed graph ICML Conference, pages 1036–1043, 2005 68 MANAGING AND MINING GRAPH DATA [210] D Zhou, O Bousquet, J Weston, B Sch- lkopf Learning with local and...
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Managing and Mining Graph Data part 10 potx

Managing and Mining Graph Data part 10 potx

Ngày tải lên : 03/07/2014, 22:21
... laws and small diameters, some other patterns have been observed in large real-world graphs These include the resilience of such MANAGING AND MINING GRAPH DATA 80 graphs to random failures, and ... of the WWW, Web “clickstream” data, sales data in retail chains, file size distributions, and phone usage data 2.2 Small Diameters Informal description: Travers and Milgram [80] conducted a famous ... distribution, and the point where the tail begins needs to be hand-picked, and (iii) the right end of the distribution is very noisy [66] However, this is the simplest technique, and seems to...
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Managing and Mining Graph Data part 11 ppt

Managing and Mining Graph Data part 11 ppt

Ngày tải lên : 03/07/2014, 22:21
... generators, we provide citations and a summary 3.1 Random Graph Models Random graphs are generated by picking nodes under some random probability distribution and then connecting them by edges ... superlinearly-more money it donates, and similarly, the more donations a candidate gets, the more average amount-per-donation is received Inset plots on (c) and (d) show 𝑖𝑤 and 𝑜𝑤 versus time Note they ... the Web [33] Graph models and generators can be broadly classified into five categories: Random graph models: The graphs are generated by a random process The basic random graph model has attracted...
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Managing and Mining Graph Data part 12 docx

Managing and Mining Graph Data part 12 docx

Ngày tải lên : 03/07/2014, 22:21
... 𝑘(𝑖) (3.14) 94 MANAGING AND MINING GRAPH DATA where 𝑘(𝑖) is the degree of node 𝑖 Note that since the generated network is undirected, we not need to distinguish between out-degrees and in-degrees ... original BA model, one node and 𝑚 edges are added to the graph every iteration Albert and 96 MANAGING AND MINING GRAPH DATA Figure 3.11 The edge copying model New nodes can choose to copy the edges ... Bianconi and Barab«si [18] try to model this Their model attaches a fitness parameter to a each node, which does not change over time The idea is that even a node 98 MANAGING AND MINING GRAPH DATA...
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Managing and Mining Graph Data part 13 pptx

Managing and Mining Graph Data part 13 pptx

Ngày tải lên : 03/07/2014, 22:21
... 𝛼.𝑑𝑖𝑗 + ℎ𝑗 (𝑗 < 𝑖) (3.18) 104 MANAGING AND MINING GRAPH DATA where 𝑑𝑖𝑗 is the distance between nodes 𝑖 and 𝑗, ℎ𝑗 is some measure of the “centrality” of node 𝑗, and 𝛼 is a constant that controls ... the current degree of node 𝑣 and 𝑑(𝑢, 𝑣) is the Euclidean distance between the two nodes The values 𝛼 and 𝜎 are parameters, with 𝛼 = 𝜎 = MANAGING AND MINING GRAPH DATA 108 giving the best fits ... preferences MANAGING AND MINING GRAPH DATA 110 The recursive nature of the partitions means that we automatically get sub-communities within existing communities (say, “RedHat” and “Mandrake” enthusiasts...
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Managing and Mining Graph Data part 14 pdf

Managing and Mining Graph Data part 14 pdf

Ngày tải lên : 03/07/2014, 22:21
... eigenvalue-versus-rank plots and many others, MANAGING AND MINING GRAPH DATA 116 Small diameters, such as the “six degrees of separation” for the US social network, for the Internet AS level graph, and 12 for ... Tertius de Wet, and Yuri Goegebeur A goodness-of-fit statistic for Pareto-type behaviour Journal of Computational and Applied Mathematics, 186(1):99–116, 2005 118 MANAGING AND MINING GRAPH DATA [16] ... Knowledge Discovery and Data Mining, New York, NY, 2001 ACM Press [35] Sergey N Dorogovtsev and Jos« Fernando Mendes Evolution of Nete works: From Biological Nets to the Internet and WWW Oxford University...
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