... calculated by dividing the transsplicing band (RNA 2) ·100 by the sum of the trans- splicing band (RNA 2) and the major GA band (RNA 3) As the amount of DiGIR2 AGU and DiGIR2DP9.2 AGU ribozymes added in ... upstream of U436 in mutated GA mRNA and to a 49 nt region of the 3¢ exon in the ribozymes, resulting in a 361 nt protected region for the trans- spliced RNA The probe was in vitro transcribed containing ... probe; RNA 2, trans- spliced GA mRNA; RNA 3, major GA band; RNA 4, major DiGIR2 AGU and DiGIR2DP9.2 AGU band Additional bands result from degradation ofRNA during incubation at trans- splicing and...
... (5-10 min) and welladapted for studies in general populations Strategy for identification of type and determinants of missingness The type of missingness was defined according to Little and Rubin ... and Rubin to characterize missing data processes operating during administration of this questionnaire In this large representative sample of the French population the proportion of missing items ... Machin D: Incomplete quality of life data in randomized trials: missing items Statistics in Medicine 1998, 17:679-96 Perneger TV, Burnand B: A simple imputation algorithm reduced missing data in...
... base pair; DNA-seq: DNA-sequencing; FISH: fluorescence in situ hybridization; RNAi: RNA interference; RNA- seq: RNA- sequencing; siRNA: small interfering RNA; UTR: untranslated region Acknowledgements ... possibility of mRNA trans- splicing in some of the cases [15] Association with copy number breakpoints Integration of RNA- seq with array comparative genomic hybridization (aCGH) data showed that, in 23 of ... membrane protein-associated protein B and C) and the carboxyterminal part of IKZF3, which harbors two Zn-finger domains IKZF3 was only detected as a fusion transcript, indicating activation of a quiescent...
... repositioning of this loop in the N348I RT is likely due to the bulky sidechain of isoleucine disrupting the network of interactions between this residue and Y342 Similarly, the introduction of leucine ... RNase H domain that form part of the nucleic acid binding tract are shown in spacefill (and colored according to domain color) B) Location of the b14-b15 loop in the p51 subunit of HIV-1 RT in ... illustrating the location of the RNase H cleavage sites in the RNA template B) Autoradiogram of the RNase H cleavage patterns of HIV-1 RTs containing mutations at residue 348 in both subunits of the...
... points In eukaryotes, basal transcription of genes is carried out by different types of nuclear RNA Polymerases (RNAP), depending upon the specific type of product involved (RNAPI ribosomal RNA, ... potential DNA binding sites for proteins of interest Chromatin Immunoprecipitation has been used as a means of detecting where proteins of interest might bind to specific genomic regions in vivo Briefly, ... bind cooperatively to the nucleosome-free region of the IFN-β promoter The binding of individual factors is insufficient for transcriptional activation, but the binding of all transcription factors...
... capability of using language Finding and analyzing errors by learners; therefore, are significant to improve learning and teaching quality Error analysis (EA) has been defined by many linguists in different ... Basing on the analysis of errors done by linguists and researchers, errors are classified into two main types: They are interlingual errors caused by the interference of the mother tongue and intralingual ... that students commit a lot of errors in using reference and they have great difficulties in using types of reference There are some following specific findings found in this study - The students...
... antibody against ferritin (PAAF) (C) Immunoblotting of recombinant human mitochondrial ferritin (rHuMt, 10 ng), protein extract from HeLa cells overexpressing human mitochondrial ferritin (MtF-HeLa, ... mass of 25–26 kDa was revealed, thus suggesting the presence of this iron-storage protein also inmitochondria from this type ofplant cells Furthermore, preliminary results indicate that ferritin ... from the binding of the inhibitor protein IF1 Biochim Biophys Acta 1556, 133–141 25 Shevchenko, A & Shevchenko, A (2001) Evaluation of the efficiency of in- gel digestion of proteins by peptide...
... sample Ais = integrated abundance of the quantitation ion of the internal standard in the sample Qis = total quantity (in micrograms) of internal standard added to the water sample V = original water ... used in this method as internal standards, are rapidly oxidized and/or chlorinated in water containing residual chlorine Therefore, residual chlorine must be reduced at the time of sampling These ... part of the performance test The correct setting of the baseline threshold, as indicated by the presence of low intensity ions, is the next most important part of the performance test Finally,...
... methyltransferases Protein involved in catabolism of external DNA Addiction module toxin, RelE ⁄ StbE family Antitoxin of toxin-antitoxin stability system YicC N-terminal domain protein Twin-arginine ... were based on the larger training set Using the final Fisher coefficients and the criterion for deciding coding ⁄ noncoding, the hypothetical ORFs in Eca1043 were re-identified A total of 49 of the ... distinguishing between protein-coding and noncoding ORFs The difference between coding and noncoding sequences can be viewed intuitively using PCA PCA defines the correlation among the variables of...
... fMet-tRNA binding to the P-site [10,12,13], probably by stabilizing IF2 binding to the 30S subunit [14], and stimulates the GTPase activity of IF2 [15] It also increases binding of mRNA to the initiation ... kasugamycin-binding site on the 30S subunit or on the 70S ribosome in the region of the mRNA-binding tunnel in the E-site and P-site [32,33] As no effect of kasugamycin on mRNA binding to the ... nucleotides in mRNA corresponding to the E-site [32] Translation of leaderless mRNA starting directly from AUG is insensitive to kasugamycin action [37] TIR dependence of translation initiation by IF1...
... phosphoglycerate kinase promoter In this case the content of recombinant protein inmitochondria was reduced by an order of magnitude However, the bulk of CYP11A1 was again in the form of aggregates insoluble ... content of the imported protein in the supernatant was 0.025% of total protein of the fraction, whereas that inmitochondria was approximately 0.3% of total protein Obviously, the supernatant containing ... CoxIV(1–25)-mCYP11A1 in whole mitochondria and the corresponding 12 000 g supernatant determined by SDS/PAGE and Western blotting of the samples containing equal amounts of total protein According to these...
... the thinner films still have crystalline structure, as shown in the Raman scattering data in Fig 4(c) The widths of the Raman peaks in the thinner films are slightly wider, indicating longer interatomic ... perturbations are introduced to the molecular system by slightly displacing the atomic positions along the directions indicated in Fig For example, the A1 phonon 1g mode is generated in MD by stretching the ... anharmonicity in thinner films The band gap in 064307-4 ORIGIN OF COHERENT PHONONS IN Bi2 Te3 PHYSICAL REVIEW B 88, 064307 (2013) the very thin Bi2 Te3 films can be wider, for example, ∼0.25 eV in 5-nm-thick...
... the thinner films still have crystalline structure, as shown in the Raman scattering data in Fig 4(c) The widths of the Raman peaks in the thinner films are slightly wider, indicating longer interatomic ... perturbations are introduced to the molecular system by slightly displacing the atomic positions along the directions indicated in Fig For example, the A1 phonon 1g mode is generated in MD by stretching the ... anharmonicity in thinner films The band gap in 064307-4 ORIGIN OF COHERENT PHONONS IN Bi2 Te3 PHYSICAL REVIEW B 88, 064307 (2013) the very thin Bi2 Te3 films can be wider, for example, ∼0.25 eV in 5-nm-thick...
... weighted moving average (WMA) By calculating the ratio of the AC components and the ratio of the DC components of the two light sources, SpO2 can be obtained from every single pulse of a PPG signal ... Scharf JE, Sankar R: Alternate pulse oximetry algorithms for SpO2 computation Proceedings of the Sixteenth Annual International Conference of the IEEE Engineering in Medicin and Biology Society ... samples in every several-second intervals In this study, the SpO2 obtained by the WMA approach was the average of SpO2 samples in an 8-second period Overlap processing was performed at 1-second interval...
... movement, and cutting forces during the cutting processes of no-wear, adherence, plowing, and cutting regimes; Komanduri et al [5–7] carried out MD simulations of nanometric cutting of single- crystal ... the start of the cutting Then the cutting forces tend to remain steady during the rest of the cutting process The formation of dislocations results in the release of the accumulated cutting energy, ... are maintained at 300 K by rescaling the velocities of the atoms The velocity Verlet algorithm with a time step of fs is used for the time integration of Newton’s equations of motion The interatomic...
... processes of a fingerprint matching algorithm is presented in Figure Fig General processes for minutiae-based fingerprint matching In minutiae-based matching, minutiae are commonly represented as minutiae ... noisy resulting in difficulty in determining dominant ridges and orientations This, in turn, makes the orientation certainty level of the fingerprint lower than that of a normal one Kinetic Sciences ... over the age of 75 due to the lack of definition in the ridges on the pads of the fingers Purdue University has made several inquiries into the image quality of fingerprints and fingerprint recognition...
... methods include H E staining and silver staining of the intestinal sections 36 Dong-Kyun Suh et al Fig Section of the ileum from a pig infected with L intracellularis a : Presence of numerous intracellular, ... one of the important factors for increasing the sensitivity of the PCR assay The increase in the number of amplification cycles may produce nonspecific DNA But nonspecific DNA was not detected in ... availability of the PCR assay for screening the prevalence of L intracellularis infection in the pig farms Macroscopic Detection of Lawsonia intracellularis in diagnostic specimens by one-step PCR examination...
... significant, increase in levels of proMMP-2 and active MMP-2 in the media C2-ceramide-induced regulation of MMP-2 is abrogated by inhibition of PKR R48 To determine a role for PKR in ceramide-induced ... in transcriptional pathways activated byspecific cytokines [21,26], growth factors [27], and extracellular stresses [28] PKR is involved in a number of cellular responses, including signal transduction, ... to the induction of c-jun and c-fos and AP-1-dependent transcription of MMP genes [10] In addition, triggering of the ceramide pathway in human keratinocytes results in overexpression of MMP-9...
... or definite osteophytes with moderate joint space narrowing; IV, severe with large osteophytes and definite joint space narrowing bScoring was as follows: +/-, minimum staining in one area of the ... tissue; +, patchy staining involving several areas; ++, moderate diffuse staining OST, osteotomy; SYV, synovectomy; TA, total joint arthroplasty Of the cytokines examined in our study, C-PTHrP ... Kellgren/Lawrence; M, male Inc.) Two envelope proteins and three core proteins derived from HTLV-I were fixed onto nitrocellulose membrane, and specific binding of IgG or IgM was distinguished byspecific secondary...