generation and refinement of homology based protein structure models
macromolecular crystallography, part d
... the connectivity of the positive density in the man.15 Another feature of protein crystals is the presence of distinct regions of protein and solvent The electron density maps in protein regions ... SOLVE and RESOLVE 33 Calculation of expected probability distributions for values of electron density in the protein and solvent regions (based on statistics of maps generated from model structures) ... sign of the imaginary part of the structure factor is undefined The best estimate of the strychnine structure factor is its real part This leads to an electron density map in which the structure and...
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Pfam: A Comprehensive Database of Protein Domain Families Based on Seed Alignments pptx
... database: Fold classification based on structure- structure alignment of proteins Nucleic Acids Res 24:206–210, 1996 Schneider, R., Sander, C The HSSP database of protein structure- sequence alignments ... (A) and alignment (B) (only part shown) KFD3_YEAST and the middle domain of RCAC_FREDI are novel members of this family (see text) The Pfam domain (C) organization of these two proteins and two ... annotation of the highest-scoring match and misannotation caused A DATABASE OF PROTEIN DOMAIN FAMILIES by multidomain proteins Pfam thus significantly reduces the task of annotators and helps establish...
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Báo cáo y học: "A systematic comparative and structural analysis of protein phosphorylation sites based on the mtcPTM database" ppt
... phosphorylated (a) serine/threonine and (b) tyrosine residues in the elements of secondary structure of the models as defined by Dictionary of Protein Secondary Structure (DSSP) [43] The three sets ... into two groups: one composed of serine and threonine residues, the other of tyrosines This grouping is based on the similar characteristics of serine and threonine, and the fact that they are usually ... serine/threonine and 219 tyrosine residues Half of the models were less than 150 amino acids long, indicating that half of the models represented single domains and the other half multidomain structures...
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frequency domain numerical modelling of visco acoustic waves based on finite difference and finite element discontinuous galerkin methods
... The bandwidth of the matrix is of the order of N2 (N denotes the dimension of a 3D cubic N domain) and was kept minimal thanks to the use of low-order accurate stencils 1 65 129 Column number of ... dimension of the matrix (i.e., the number of rows/columns) and the number of non-zero coefficients per row (nz) The dimension of the matrix depends in turn of the number of cell (ncell), of the ... an increase of the number of non zero coefficients per row, a decrease of the number of cells in the mesh and an increase of the number of nodes in each element The combined impact of the parameters...
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Tài liệu Báo cáo khóa học: Further insights into the assembly of the yeast cytochrome bc1 complex based on analysis of single and double deletion mutants lacking supernumerary subunits and cytochrome b pdf
... transmembrane helix of subunit and helices G and H1 of cytochrome b and between the N-terminus of subunit and helix a of cytochrome b The figure was constructed from the crystal structure of the yeast ... cytochrome c1 (45% of the wild-type content), a barely detectable amount of Rieske protein and low levels of cytochrome b (12% of the wildtype content) Core protein and core protein decreased ... b and ISP were reduced to about 12% and 27% of the original levels Cytochrome c1 and core proteins and decreased by about 50%, whereas a greater decrease was found in the case of subunits 7, and...
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Báo cáo khoa học: "Development of synthetic peptide ELISA based on nonstructural protein 2C of foot and mouth disease virus" doc
... ecnabrosbA ecnabrosbA ASILE editpep C2 fo noitadilav lacigolores rof selpmas ares enivoB DMF TIKEHC elba T 913 kcolb ot ruoh tsael ta rof Co73 ta llew rep )T-SBP ni ASB %1 ,enitaleg %01( reffub gnikcolb ... aeroK ni kaerbtuo DMF eht gnirud elttac 32 morf detcelloc saw puorG spuorg ruof otni dedivid erew ares enivob xis-ytrof ,stik rehto htiw ASILE editpep C2 eht fo stluser tset eht erapmoc oT )KU ... yllatnemirepxe ,evitisop dleif sa deifissalc erew ares eseht dna noitaulave rof deraperp erew ares enivob thgie-ytroF )1 giF( noitcefni ot roirp lamina emas eht morf mures evitagen eno dna IPD...
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Reliability analysis of a power system based on the multi state system theory
... capacity of the system is above 22.8 Ah, the system is reliable, though the capacity of a battery is lower than 5700 mAh Suppose the capacity of the first branch is 5600 mAh and the capacity of other ... {5550 ≤ G < 5700} Based on the operators defined in (7) and (8), the universal generating function of the branches can be obtained, and then the universal generating function of the power system ... number of possible states of the system; Gs is the performance of the system; qs is the corresponding probability M U j ( z ) = ∑ ql ⋅ z gl f ( g k , gl ) s =1 s system; N is the number of subsystems...
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Tài liệu Creating Constraints, PrimaryKeys, Relationships Based on Multiple Columns pdf
... cCols.Add("ChildIndex1", typeof(Int32)).Unique = true; cCols.Add("ParentKey1", typeof(Int32)); cCols.Add("ParentKey2", typeof(Int32)); cCols.Add("ChildData1", typeof(String)); cCols.Add("ChildData2", typeof(String)); ... name of the foreign key constraint parentCol The column in the parent table childCol The column in the child table parentCols The array of columns in the parent table childCols The array of columns ... between a parent and child table parentCol A column in the parent table childCol A column in the child table parentCols An array of columns in the parent table childCols An array of columns in the...
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Tài liệu Gait Pattern Classification of Healthy Elderly Men Based on Biomechanical Data ppt
... Standard deviation in parentheses l p < 05, between Yl and all elderly subjects; + p < 05, between Yl and El, E2, and E3; * p < 05, between El and Y, E2, and E3; p < 05, between El and Yl, E2 and ... average age of 28.0 years, and none were over 35 years old None had a limb length discrepancy larger than l&m, and all Table 1: Mean Values of the Demographic Information and of the Phasic and Temporal ... objectives of this study were twofold Using a single but mixed group of able-bodied young and elderly men, we hoped (1) to distinguish the gait patterns of these populations based on phasic and temporal...
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Báo cáo khoa học: "Automatic Acquisition of English Topic Signatures Based on a Second Language" potx
... The remainder of the paper is organised as follows Section describes the process of acquisition of the topic signatures Section demonstrates the application of this resource on WSD, and presents ... At the end of this step, we have produced a set C, which consists of Chinese words {c1 , c2 , , cn }, where ci is the translation corresponding to sense si of w, and n is the number of senses ... than that of WordNet However, researchers argue that the granularity of WordNet is too fine for many applications, and some also proposed new evaluation standards For example, Resnik and Yarowsky...
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Báo cáo " MODEL OF CONDUCTIVITY FOR PEROVSKITES BASED ON THE SCALING PROPERTY OF GRAIN BOUNDARY " ppt
... M Rusu, Fractal analysis of micrographs and adsorption isotherms of La1-xSrxCoO3 samples, Journal of Optoelectronics and Advanced Materials, Vol.5, No.5(2003) C.N.Rao and B Raveau, Collossal Magnetoresistance, ... area of each SEM photograph, then divide this area into the smaller squares and use them to fill each grain area The number of squares filled into one grain is just the G − area and the number of ... log(G − Length) plot Model of conductivity for perovskites based on 53 Table summarizes the measurement details and results (D, f, L and L ) For the calculation of f , the percolation threshold...
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Báo cáo khoa học: "Dependency Parsing of Japanese Spoken Monologue Based on Clause Boundaries" docx
... words, the type of dependency is the lexicon, part -of- speech and conjugated form of the rightmost ancillary word, and if not so, it is the part -of- speech and conjugated form of the rightmost ... boundary analysis, and dependency parsing were automatically performed and then modified by hand Here, the specification of the partsof-speech is in accordance with that of the IPA parts -of- speech used ... Here, the head bunsetsu of the final bunsetsu of a clause boundary unit is identified Let B (= B1 · · · Bn ) be the sequence of bunsetsus of one sentence and Sf in be a set of dependency relations...
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Báo cáo khoa học: A novel transmembrane topology of presenilin based on reconciling experimental and computational evidence pptx
... the truncation of the protein studied and the nature of the reporter gene used, and therefore these studies must always be interpreted with caution Antibody experiments on native proteins have ... opposite localization of the loops between HRI and HRVI compared to the other models Accumulations of contradictory results are found in the C-terminal part, and consequently several models have been ... prediction of all-helical membrane protein structure and topology Biochemistry 33, 3038–3049 45 Kyte J & Doolittle RF (1982) A simple method for displaying the hydropathic character of a protein...
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Báo cáo khoa học: "Framework of Semantic Role Assignment based on Extended Lexical Conceptual Structure: Comparison with VerbNet and FrameNet" ppt
... predicates and their semantic functions ure represents the action changing the state of j The inner structure of the second argument of go represents the path of the change The overall definition of our ... of rewriting rules for LCS structures However, automatic construction of a consistent relation graph of semantic frames may be possible based on lexical structures We believe that this kind of ... their arguments and the semantics of the entire structure of an LCS structure is calculated according to the definition of each primitive For instance, the LCS structure in Fig- act(x) affect(x,...
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Báo cáo khoa học: "A PREFERENCE MECHANISM BASED ON MULTIPLE CRITERIA RESOLUTION" ppt
... integer which indicates how strong the relation of preference is; LHS and RHS (the left-hand side and the righthand side of the rule) are the descriptions of the two (sub)trees to be compared; - >= ... Iradeoff between the declarativeness permitted by a scoring system and the difficulty of finding the right sco~es for a p-rule set of nontrivial coverage If Pi (i=l, n) stands for the score of ... [Jackendoff 1985] According to this framework, preference can only been decided on the basis of a number of criteria, and a preference mechanism is not based on a dichotomy between correct and wrong...
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SYNTHESIZE AND INVESTIGATE THE CATALYTIC ACTIVITY OF THREE-WAY CATALYSTS BASED ON MIXED METAL OXIDES FOR THE TREATMENT OF EXHAUST GASES FROM INTERNAL COMBUSTION ENGINE
... teachers of Department of Organic and Petrochemical Technology and the technicians of Laboratory of Petrochemistry and Catalysis Material, Institute of Chemical Engineering for their guidance, and ... conversion of C3H8, CO and NO and lower light-off temperature in comparison with Ce0.5Zr0.5O2 TWC [74] Hyuk Jae Kwon reported that the light-off temperature of the oxidations of CO and C3H6 over ... formation of these is a function of the electronic properties of the solid, and the structure and kind of bonds (6) The catalyst surface is markedly heterogeneous both with respect to oxygen and to...
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Báo cáo hóa học: "Assessment of skeletal muscle fatigue of road maintenance workers based on heart rate monitoring and myotonometry" docx
... Page of (page number not for citation purposes) Journal of Occupational Medicine and Toxicology 2006, 1:20 left hand right hand 500 R2 = 0,7665 Days 350 300 R2 = 0,3725 left hand right hand 200 ... accumulation of K+ in the t-tubules and interfibre spaces of the muscle LFF is characterized by a relative loss of force at low frequencies of stimulation and a slow recovery over the course of hours ... work load and to relax partly; Tables and show the comparison of the different muscle groups which frequency and stiffness go beyond the norm after the work week cycle and percent of the workers...
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Báo cáo hóa học: " Anomalous heat transfer modes of nanofluids: a review based on statistical analysis" doc
... last stages of the fluid creation Note that the “Quality” of a nanofluid represents the extent of achievability of the desired properties of the mixture The desired properties of a nanofluid are: ... published work and enables the demonstration of a general view of the thermal performance of nanofluids The second level focuses on the most commonly studied nanofluid types and compositions and makes ... optimisation of the performance of nanofluids and the development of appropriate computational models to describe their behaviour (e) A larger amount of experimental studies are related to conduction and...
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Báo cáo hóa học: " Research Article Synthesis of an Optimal Wavelet Based on Auditory Perception Criterion" potx
... Critical band a: Critical band b: Critical band f: Critical band e: Critical band 13 c: Critical band g: Critical band c: Critical band 11 f: Critical band 14 d: Critical band h: Critical band a: ... Critical band 15 a: Critical band 18 b: Critical band 19 c: Critical band 20 b: Critical band 16 0.9 d: Critical band 21 c: Critical band 17 (d) (c) Figure 12: Magnitude squared frequency response of ... critical band, and the combined decimators follow them Note that i in Hi (z) denotes the critical band numbers in ascending order of center frequencies of the respective bands The lower and upper...
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Báo cáo hóa học: " Research Article Design and Experimental Evaluation of a Vehicular Network Based on NEMO and MANET" pdf
... NEMO and MANET connectivity In this paper, the focus is on investigating the operation and performance of the simultaneous usage of VANET and NEMO routes An initial set up of a field testbed based ... Processing For the case of the MANEMO subsystem described in Section 4.2, measurements of latency and throughput have been collected using both the VANET and the infrastructure segments of the testbed ... set of indoor and oudoor experiments have been conducted also at the Rocquencourt campus of INRIA and this section presents and analyzes most interesting results 6.1 Experimental Setup Details and...
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