cos and cleaved amplified polymorphic sequence caps markers
The Design and Implementation of a Sequence Database System * docx
... isolateddiscussionof the sequence E-ADT We then return to the issueof how sequences relations interact in Section4 and The Sequence E-ADT An important component of the model of a sequenceis the ordering ... Domain who are primarily interested in sequencedata, for example, to directly query named sequences without having to embed Figure 1: Data Sequence the sequences inside relational tuples While ... inyoked on valuesof that type An ADT to handle arithmetic and booleanexpressions,constantvalues can itself be a structured complex type like a sequence, with and functions is part of this layer An...
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Đề tài " Lagrangian intersections and the Serre spectral sequence " ppt
... INTERSECTIONS AND THE SERRE SPECTRAL SEQUENCE 683 sv (0) = ∗ and sv = o ◦ sv Moreover, for each y ∈ M (x) there exists a unique t ∈ [0, f (x)] and a unique path y : [0, t] → M (x) such that y(t) = y and ... JEAN-FRANCOIS BARRAUD AND OCTAV CORNEA ¸ E(k) from this spectral sequence to the spectral sequence EF (L, L ) By Theorem 1.1 this last spectral sequence is isomorphic to the Serre spectral sequence r Ep,q ... Both V and V respect filtrations and thus they induce spectral sequences morphisms EF (V ) : EFS n (L, Lf ; G) → EF (where EF is the spectral sequence induced by the degree filtration on C2 ) and...
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Báo cáo khoa học: Tracking interactions that stabilize the dimer structure of starch phosphorylase from Corynebacterium callunae Roles of Arg234 and Arg242 revealed by sequence analysis and site-directed mutagenesis doc
... Cloning and sequencing of the StP gene Using the PCR primers p1 and p2, a 710-bp fragment was amplified from chromosomal C callunae DNA, blunt-end cloned into pUC 18, and sequenced The sequence ... StP is 41% identical to rmGP and 42% identical to EcMalP Figure maps structural and functional elements of rmGP [4] and EcMalP [3] onto the linear sequence of StP and thus measures the extent ... alignment of the amino acid sequences of StP, rmGP and maltodextrin phosphorylase from Escherichia coli (EcMalP) is shown in Fig rmGP and EcMalP were chosen for structure-based sequence comparison because...
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Báo cáo hóa học: " Circulating viral core and E1 antigen levels as supplemental markers for HCV Chronic hepatitis" doc
... enzyme was inactivated and double stranded cDNA was denatured at 95°C for 10 and chilled on ice to keep the DNA strands apart The amplification of the highly conserved 5'-UTR sequences was done in ... antigen and both enzymes and the correlation coefficient values were (A; r = 0.44, P value is 0.008) for ALT and (B; r = 0.47, P value is 0.003) for AST And also positive correlation between E1 and ... Anand and Velez, [44] and contradictory to results obtained by Beld et al., [45]; Sabin et al., [17] and Hassan et al., [16] Although it seems conflicting that results of Hassan et al., [16] and...
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Báo cáo hóa học: " Cellulose fibres, nanofibrils and microfibrils: The morphological sequence of MFC components from a plant physiology and fibre technology point of view" pptx
... [12-15] Terms and sizes according to terminology and morphology reported in the literature In general terms, the production of homogeneous fibril qualities may require major costs, including costs related ... encountered in cotton, ramie, jute and wood fibres Blackwell and Kolpak [15] reported also the occurrence of elementary fibrils with diameters of approximately 3.5 nm in cotton and bacterial cellulose, ... three passes and 1,000 bar pressure (C) Film made of MFC, homogenised with five passes and 1,000 bar pressure (D) Film made of MFC produced with TEMPO-pre-treated fibres, three passes and 200 bar...
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Báo cáo hóa học: " Research Article A Study of Residue Correlation within Protein Sequences and Its Application to Sequence Classification" pptx
... related sequences and searching for relationships between sequences This method expands the sequence alphabet to include the gap symbol For ΣA we define and use a new alphabet: 3.2 Sequence alphabets ... are dependent on sequence length and residue frequency, we used the shuffle command from the HMMER package to conserve these parameters in our random sequences We sampled 1000 sequences from our ... compared known coding sequences to random sequences in order to generate a P value signifying the chance that our observed MI score or higher would be obtained from a random sequence of residues...
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Báo cáo khoa học: "Analysis of Salmonella enterica serotype Enteritidis isolated from human and chickens by repetitive sequence-PCR fingerprinting, antibiotic resistance and plasmid profiles" ppsx
... dezylana erew etalosi hcae fo AND dimsalp dna stcudorp RCP-per rof snrettap dnaB )aeroK ,reenoiB( tik noitalosi AND dimsalp gnisu siserohportcele leg egoraga dna noitcartxe AND ,sisyl llec ot detcejbus ... relcyc lamreht AND II ONU a htiw demrofrep erew snoitacifilpmA )aeroK ,reenoiB( esaremylop AND fo U dna setahpsohpirt edisoelcunyxoed Mm 52.1 ,remirp hcae fo lomp 02 ,etalosi hcae fo AND lm gniniatnoc ... ta derots dna AND sa desu saw tnatanrepus ehT g × 000,8 ta degufirtnec dna ,nim rof deliob erew yehT retaw dellitsid fo lm 005 ni dednepsus erew seinoloc laudividni 3-2 ,noitalosi AND roF snoitacifidom...
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Báo cáo khoa học: "Random amplified polymorphic DNA (RAPD) analysis of Mycobacterium tuberculosis strains in India" docx
... loisyhP ) ( elttac ubeZ ni gnildnah lufsserts detaeper gnirud esnopser lacigoloisyhp eht no knar laicos fo tceffe ehT SC anilaG ,A aleuhirQ ,F odnilaG ,J onaloS 63 2501-7401 ,06 ,6991 vaheB loisyhP...
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Báo cáo y học: "Antibodies against PM/Scl-75 and PM/Scl-100 are independent markers for different subsets of systemic sclerosis patients" doc
... the criteria of the EUSTAR and DNSS network [13,14] Briefly, diffuse SSc (dSSc) and limited SSc (lSSc) were defined according to LeRoy and colleagues [16] and the DNSS and EUSTAR criteria based ... by the commonly used standards of the DNSS and EUSTAR network Antibodies against PM/Scl-75 and PM/Scl100 can be considered independent markers for different SSc subsets and show partial differences ... for citation purposes) KH and AK helped to provide preclinical analyses, statistics, and graphics and to write the manuscript CD, AJ, LK, and WM helped to develop the LIA and to perform the tests...
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The nature, pattern and function of human sequence variation docx
... around 25% of the sequence While no clear sequence properties of ‘hotspots’ and ‘coldspots’ of recombination emerged, in general coldspots were found to be larger than hotspots, and hotspots tend ... identified and/ or confirmed 15 genes (including the immune-cell surface molecules CD4, CD5, RANTES, HLA class I, and others) that affect infection with human immunodeficiency virus (HIV-1) and disease ... sites, experimentally, and not to rely strictly on in silico analyses In contrast, Eric Lander (Whitehead Institute, Cambridge, USA) showed the power of comparative whole-genome sequence analysis...
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Characterization of Indian cattle breeds, Ongole and Deoni (Bos indicus) using microsatellite markers pot
... (+0.1) and 0.50 (+0.1) in Ongole and Deoni breeds, respectively The PIC values of the polymorphic loci ranged from 0.15 to 0.79 in Ongole and 0.13 to 0.80 in Deoni breeds Six Ongole specific and ... isolated and assessed for purity following standard molecular biology protocols (18) Microsatellite analysis Five di- nucleotide markers, BMS1716, BMS2057, BMS2270, BMS2840 and BMS2847 (19) and five ... Microsatellite markers, by virtue of their codominant and multiallelic nature prove to be efficient in genetic diversity studies, pedigree evaluation and genetic mapping as compared to other molecular markers...
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Báo cáo y học: "Regional characterization of energy metabolism in the brain of normal and MPTP-intoxicated mice using new markers of glucose and phosphate transport" doc
... EL and HA: carried out the immunofluorescence assays and drafted the manuscript; JLB and MS: conceived the envelope-derived tagged ligands while; JLB, HA, ML and JT: generated, optimized and ... regional distribution of the inorganic phosphate (Pi) and glucose transporter in the brain of normal and MPTPintoxicated mice Pi and glucose represent key molecules in cellular energy metabolism ... brain of normal and MPTP-intoxicated mice using new markers of glucose and phosphate transport Journal of Biomedical Science 2010 17:91 Submit your next manuscript to BioMed Central and take full...
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Báo cáo y học: " Colorectal carcinoma: nucleosomes, carcinoembryonic antigen and ca 19-9 as apoptotic markers; a comparative study" potx
... values of 29.2% and 25.2% for CEA and CA 19-9, their cutoff values of ug/l and 31 Ku/l respectively While the positive rates reported by Chan and Sell,[31], were 70% and 30% for CEA and CA 19-9, ... nucleosomes, CEA and CA 19-9 as apoptotic markers of colorectal carcinoma and to determine which one is more specific and sensitive for clinical use CEA is a product of columnar and goblet cells ... apoptosis and central necrosis that in its turn would elicit local and systemic inflammatory responses and hence higher nucleosomes production [26] The relationship between apoptosis and the degree...
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báo cáo khoa học: "Characterization and development of EST-derived SSR markers in cultivated sweetpotato (Ipomoea batatas)" ppsx
... microsatellites, are tandem repeats of 2-6 bp DNA core sequences, which are widely distributed in both non-coding and transcribed sequences, commonly known as genomic-SSRs and EST-SSRs [5] With ... genomic SSR markers [13,16-18] and can be served as anchor markers for comparative mapping and evolutionary studies [19,20] In sweetpotato, the genomic SSRs were originally developed by Jarret and Bowen ... Jarret and Bowen [21] and used in inheritance evaluation and mutation mechanisms of microsatellite markers [22], paternity analysis [23] and assessment of genetic diversity and relationship [24,25]...
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báo cáo khoa học: " Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum)" pdf
... and buds, and Sanger-sequenced several thousand ESTs [13,14] From these libraries, forty-three SSR and sixteen SNP markers have been mapped genetically and, together with AFLPs, a number of markers ... 0.001) Five markers were isolated at a lod of The remaining markers formed linkage groups using a lod threshold between and There were two small groups, of two and three markers, and seven larger ... the numbers of SNPs and SSRs identified and in the biological informativeness of those markers The approach is extremely cost-effective for species with unsequenced genomes and would be greatly...
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Báo cáo sinh học: "Accuracy of direct genomic values in Holstein bulls and cows using subsets of SNP markers" docx
... training and evaluation populations [10,15,16] At the extreme, even in the absence of LD between markers and QTL, markers can predict family relationships between animals If animals in the training and ... the study and methods, carried out the statistical analysis and drafted the manuscript MSK and BJH participated in the analysis, had a role in data acquisition, assembly and data QC and contributed ... of 1,847 bulls born between 1955 and 2004 and a validation set of 297 young bulls born between 2001 and 2004, which represented progeny test teams for 2007, 2008 and 2009 A second validation set...
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Báo cáo y học: "All motifs are not created equal: structural properties of transcription factor - dna interactions and the inference of sequence specificity" doc
... processes and responses, and is a central force in the development and differentiation of multicellular organisms There has thus been considerable interest in understanding how genome sequences ... approaches [25], and direct modeling of the relationship between sequences and expression data [26, 27] Although the biological and statistical models, descriptions of binding sites and computational ... sites, and that our structural and biochemical understanding of the interactions between transcription factors and DNA can be used to guide de novo motif detection methods Constraints on Sequence...
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tiểu luận kỹ thuật di truyền- kỹ thuật rapd (random amplified polymorphic dna)
... trước sau thực phản ứng PCR Sự cắt tạo hai kết Một làm giảm số lượng băng khó xác định (complex band), điều làm dễ dàng cho việc đánh giá đa dạng di truyền Hai tạo đa hình mẫu có hạn chế đa hình...
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Modelling, simulation, and control of polymorphic crystallization
... obstacles and difficulties in my research I am greatly indebted to my parents and family for their concerns and supports Last but not least, I thank and praise my God, Jesus Christ, for His grace and ... ready and available for my research and to all academic and administrative staffs in the Chemical and Biomolecular Engineering Department who have directly and indirectly help with my research ... inspiration, encouragement and their detailed and constructive comments on my research I sincerely thank Dr Lakshminarayanan Samavedham and Dr Qing-Guo Wang for their priceless inputs and advices during...
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báo cáo khoa học: " Sequence diversity in three tomato species: SNPs, markers, and molecular evolution" pptx
... every position and obtained analysis-specific consensus sequences These consensus sequences were aligned to the original unigene sequence and the predicted CDS to estimate the beginning and end of ... Additional file Molecular markers experimentally tested Molecular markers that returned amplification products both polymorphic and non -polymorphic "MNS", minimum number of sequences of any species ... intraspecific SNPs in S lycopersicum (L) ESTs and interspecific SNPs between S lycopersicum and S habrochaites (LxH) and between S lycopersicum and S pennellii Perl and R [40] scripts were developed to...
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