Báo cáo khoa học: Protein hyperthermostability – current status and beyond Sotirios Koutsopoulos pdf

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Báo cáo khoa học: Protein tyrosine phosphatases: sequences and beyond ppt

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Báo cáo khoa học: "Multi-Field Information Extraction and Cross-Document Fusion" pdf

... positive and negative exam-ples of fact extractions and train Rote, Na¨ıve Bayes, and Conditional Random Field extraction modelsfor fact extraction from individual Web pages. Wethen propose and ... statistical extraction systems (such asHMMs and CRFs) are trained using hand-annotateddata. Annotating the necessary data by hand is time-consuming and brittle, since it may require large-scale ... extrac-tors, a more attractive alternative has been proposedby Brin (1998), Agichtein and Gravano (2000), and Ravichandran and Hovy (2002).483Essentially, for any text snippet of the formA1pA2qA3,...

Tài liệu Báo cáo khoa học: Protein kinase CK2 activates the atypical Rio1p kinase and promotes its cell-cycle phase-dependent degradation in yeast pdf

... promoter) weregenerated using yeast strain YMA69 (Mat a, rio1::HIS3,ade 2–1 , his 3–1 1, 15, leu 2–3 , 112, trp 1–1 , ura 3–1 , can 1–1 00[pMA 221]). The haploid rio1-deletion strain was rescued byplasmid ... One-thousand -and- onesubstrates of protein kinase CK2? FASEB J 17, 34 9–3 68.4 Allende CC & Allende JE (1998) Promiscuous subunitinteractions: a possible mechanism for the regulation of protein ... Bradford MM (1976) A rapid and sensitive method forthe quantitation of microgram quantities of protein utilizing the principle of protein dye binding. AnalBiochem 72, 24 8–2 54.44 Sambrook J, Fritsch...

Tài liệu Báo cáo khoa học: Effect of ionic strength and oxidation on the P-loop conformation of the protein tyrosine phosphatase-like phytase, PhyAsr docx

... (PhyAsrI200; Protein Data Bank: 2PSZ), 300 mm (PhyAsrI300; Protein Data Bank: 3D1O), 400 mm (PhyAsrI400; Protein DataBank: 3D1Q), and 500 mm (PhyAsrI500; Protein Data Bank:3D1H), and with ... (red) (Protein Data Bank: 1YMK) and oxidized (blue) (Protein Data Bank: 1YMD) Cdc25B.R. J. Gruninger et al. Effect of ionic strength and oxidation on PhyAsrFEBS Journal 275 (2008) 378 3–3 792 ... (yellow) (Protein Data Bank: 2PSZ) and oxidized (gray) (Pro-tein Data Bank: 2PT0) PhyAsr, with oxidized PTP1B (light blue) (Protein Data Bank: 1OEO), and PTP1B with the general acid loop (GA) and active...

Tài liệu Báo cáo khoa học: "Limitations of Current Grammar Induction Algorithms" pptx

... POS-taggingalgorithm and hand-corrected POS-tags. This didnot lead to improvement.2 Current Grammar Induction Models2.1 AlgorithmsGrammar induction models can be split up into twotypes: tag-based and word-based ... labelled), and only induce rulesusing the given tags. This kind of work is doneby, for instance, Klein and Manning (2005). On theother hand, word-based models accept plain text asits input, and ... inferior to very simplebaselines. As an attempt to ameliorate this, and asan attempt to conﬁrm Klein and Manning’s (2002) and Bod’s (2006) thesis that good enough unsuper-vised POS-taggers...

Tài liệu Báo cáo khoa học: Protein farnesyltransferase inhibitors interfere with farnesyl diphosphate binding by rubber transferase pdf

... anallylic diphosphate initiator, and either chaetomellic acid A (SG- 2–2 9)or its analog SG- 2–9 6. DMAPP was varied in the presence of 20 lMSG- 2–2 9 (d)or20lMSG- 2–9 6 (s), while various concentrations ... acid dilithium salt(SG- 2–9 6, 4)(Z)-2-nerolyl-3-methyl-butenedioic acid dilithium salt (SG- 1–2 7, 5)(Z)-2-farnesyl-3-methylbutenedioic aciddilithium salt (SG- 1–2 9, 6), and (Z)-2-geranyl-3-methylbutenedioic ... vivo. Chaetomellic acid A (SG- 2–2 9, 2) and a-hydroxyfarnesylphosphonic acid(HFPA, 3) are known inhibitors of protein farnesyltransferases, which covalently modifyproteins with a FPP molecule....

Báo cáo khoa học: Protein aggregation and amyloid ﬁbril formation prediction software from primary sequence: towards controlling the formation of bacterial inclusion bodies pot

... 1698, 13 1–1 53.3 Dobson CM (1999) Protein misfolding, evolution and disease. Trends Biochem Sci 24, 32 9–3 32.4 Harrison RS, Sharpe DC, Singh Y & Fairlie DP (2007)Amyloid peptides and proteins ... Sci 102,163 9–1 648.13 Teng PK & Eisenberg D (2009) Short protein segmentscan drive a non-ﬁbrilizing protein into the amyloidstate. Protein Eng Des Sel 22, 53 1–5 36.14 Fernandez-Escamilla ... form b-strands. Hamodrakaset al. [26] have similarly looked for ‘conformationalswitches’ in sequences – regions with a high predictedtendency to form both a-helices and b-strands – usingthe...

Báo cáo khoa học: Protein–protein interactions and selection: yeast-based approaches that exploit guanine nucleotide-binding protein signaling doc

... cytoplasmic protein X, and the pro-tein X–Gc fusion protein and integral membrane protein Y in its native form were coexpressed in aste18D strain. The interaction between protein X–Gc and protein ... several interactions, including not only protein protein but also ligand–receptor and receptor– protein interactions. These systems can recognize theon–off switching of a signal, such as the ... – protein protein interactionsYeast–mammal chimeric Ga systemMedici et al. [78] constructed an intelligent system foranalysis of protein protein interactions by managingheterotrimeric G-protein...

Báo cáo khoa học: Protein–protein interactions and selection: generation of molecule-binding proteins on the basis of tertiary structural information potx

... methodology forelucidating protein protein interactions and selectingspeciﬁc binders to novel target proteins, and the ﬁrst and second minireviews focus on the detection of protein protein interactions ... newgenome sequences and protein structures have revealed various small,nonantibody scaffold proteins. Accurate structural descriptions of protein protein interactions based on X-ray and NMR analyses ... (HyHEL-10) Fv–antigen com-plex. Local structural changes in the protein antigen and water-mediated interactions of Fv–antigen and lightchain–heavy chain interfaces. J Biol Chem 274, 2762 3– 27631.20...

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